Gene Hmuk_3187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_3187 
Symbol 
ID8412740 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp3078992 
End bp3079315 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content64% 
IMG OID645021534 
Producttranscription termination factor Tfs 
Protein accessionYP_003178999 
Protein GI257389226 
COG category[K] Transcription 
COG ID[COG1594] DNA-directed RNA polymerase, subunit M/Transcription elongation factor TFIIS 
TIGRFAM ID[TIGR01384] transcription factor S, archaeal 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value0.725935 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.117173 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGTTCT GTGACGACTG CGGTTCGATG ATGAAAGCCG AAGACGGCGT CTGGGTCTGT 
GGCAGCTGCG GTGCCGAGCG GGCCCGCGAC GCGGCGGACG AAAGTTCGAT GGTGACCACG
CAGGGCCAGG AAGAGAGCGA GATCGTCGAC ACTTCCGAGG TCGAGGCCGA AGACATGGGG
CCGACGACGG ACGCACACTG TCCCGAGTGT GGCAACGACC GGGCCTTCTG GGAGATGAAG
CAGATCCGGG CCGCCGACGA GTCCGAGACG CGCTTTTTCA CCTGTACCGA GTGCGACCAC
AAGTGGCGCG AAGACGACCA CTGA
 
Protein sequence
MEFCDDCGSM MKAEDGVWVC GSCGAERARD AADESSMVTT QGQEESEIVD TSEVEAEDMG 
PTTDAHCPEC GNDRAFWEMK QIRAADESET RFFTCTECDH KWREDDH