| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hmuk_2968 |
|---|
| Symbol | |
|---|
| ID | 8412521 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halomicrobium mukohataei DSM 12286 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013202 |
|---|
| Strand | + |
|---|
| Start bp | 2849560 |
|---|
| End bp | 2850378 |
|---|
| Gene Length | 819 bp |
|---|
| Protein Length | 272 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 645021315 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_003178780 |
|---|
| Protein GI | 257389007 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.118258 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGAAGA CGGCGCTGAT AACGGGTGCC TCCTCTGGCA TCGGGCGGGC GACGGCCGAG
GCGTTTCTCG CGGACGACTG GCAGGTGTGG GCGACGGCCC GGAACGAGGC CGACGTGGCC
GGTCTCGCCG ACTCGGGTGC GAAGACGGCC GAACTCGACG TGACCAACGC TCGCGAGTGC
GAGCGGGTCG TCGAGACGGT CGTCGGGGCC GAGGGACGCA TCGACTGTCT GGTCAACAAC
GCGGGCTACG GCCAGTACGG CCCCCTCGAA GACGTGACGA CGGCACAGCT CCACGAGCAG
TTCGACGTGA ACGTCTACGG CCCCCACCGA CTCACGCGGG CGGTCCTGCC TCACATGCGG
GACCGCGAGG ACGGCACGAT CGTCAACGTC TCCAGCGTCA ACGGCCGGAT CGCGACGCCG
GGGGCCGGAG CCTACGCCGG CTCGAAGTTC GCCCTCGAAG CGATGAGCGA CTCGCTGCGA
GCCGAGGTCG CCGACTTCGG CGTCGACGTG GTCCTGGTCG AGCCCGGTCC CGTGGAGACG
AACTTCGTCG ACCGGGCGGG CGAGGCGATG GCCGACACGG ACGCCTCCGG CGCGTACGGG
TGGCTCTACG AGCTCTACGA GGACACCGCG CTGGTCAGCG AGAACGCGGT GTCGGTCTCG
CCAGAAGCGG TCGCACACGC GATCCGTGAC GCCGCCGTGA CCACCGATCC ACGGCCGCGA
TACCCCGTCG GCCAGTTCGC TCGCGTCGCC ACCCTCGCCA GCCACCTCCC GGGTCGCTGG
CGGGACCTGG CGGTCGCCGT CCTGCGGAAG CTCGTCTGA
|
|---|
| Protein sequence | MTKTALITGA SSGIGRATAE AFLADDWQVW ATARNEADVA GLADSGAKTA ELDVTNAREC
ERVVETVVGA EGRIDCLVNN AGYGQYGPLE DVTTAQLHEQ FDVNVYGPHR LTRAVLPHMR
DREDGTIVNV SSVNGRIATP GAGAYAGSKF ALEAMSDSLR AEVADFGVDV VLVEPGPVET
NFVDRAGEAM ADTDASGAYG WLYELYEDTA LVSENAVSVS PEAVAHAIRD AAVTTDPRPR
YPVGQFARVA TLASHLPGRW RDLAVAVLRK LV
|
|---|
| |