Gene Hmuk_2681 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_2681 
Symbol 
ID8412231 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp2565286 
End bp2567589 
Gene Length2304 bp 
Protein Length767 aa 
Translation table11 
GC content65% 
IMG OID645021026 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_003178494 
Protein GI257388721 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.470169 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTCTG AGACATCATC TCTCCTTCCT GAGTTTATCG GGGACAGTTA CGCCCTGCGA 
CTCGGACTCG CGCTGGCGCT GGCGGTGATC GTCGTCATCG CCGTCGGCGC TGTGGTGAGC
GTCCAGGCTT CAGACGAGCT GGAGTCCGAC GTAGCGTCCG ATCTGCGCGC GACCTCGGCG
ACTCAGGCCG ACCAGATCGA CGCGTGGCTC GAGTCGGCTC GACAGAGCGT CCGGATGACC
TCTGCGCTGC CGGTCTTCGA GTCCGGGTCG ACCAGCGAGA TACAGGCGCA GTTGAACACC
TTACAGGACA ACGACAGGCT CCCGGCCGAC GTCGTCGCAG TCCACTACGT CGACACGACG
ACGATGGAGA TCGAGGCCAG TTCGAACGAG GACTTCGTCG GCGTCGACGC CAGCGAGCAG
GGAGCGCCGT TCGCGACCGA CCCCCCGAGC TTCGAGGGGC CGGACGACAC GCACGTGACC
GATCCATTCC AGGTCTCGAT CGTCGACCAC CCGATCATCG CCGTTCTCTC GCCGGTCGAG
GGCGACAGCG ATCACGCGAT CGTCTTCATG ACCGATCTGA AGGAGCGGAC GGAGGCGTTC
TCCGACCAGC GTGACGGGTC ATACACCGCC GTGGTCAACG ACGACGGTCA GTACATCGCC
CACCCCAACA GTAGCAAGAT CAACACGGCA CACGACGGCA GCATGACGAT GCCGGCGTCG
GGTGAATCCG GGTTCGTGGC GATGGGCGAC ACGCTGATGG GCATGACGAC GCTCGAAACG
GCCGACTGGA CGGTGATGGT CCACTCCGAC CGGAGCGAGG CCTACGCGCT GAGCTCCCAG
ATCAACTCCG ACCTGATCGG GATCGTGTTG TTCGCGGTGA TCAACCTCGG GCTCGTCGGC
GTCACGATCG GGAGCGGCAC GATCGTCTCC CTTCGCCGAC TCTCCAACAG GGCCGAGGAG
ATGGGTGCCG GCGACCTCGA CGTGGACCTG ACCACCGCCC GGACCGACGA GATCGGCTCG
CTGTACCAGT CGCTCGACGA CATGCGGACG AACCTCCGAG AGACGATCTC AGACGCCGAG
GAGGCACGAC GCGAGGCCGA GCAAGCCAAG AGCGACGCCC AACAGGCTCG TGAGGACGCC
GAGGAAGAGC AGGCAGAGAT GGAGGCACTG ACGGGCCACC TCGAACTGAA GGCCACCGAG
TACAGTGACG CACTGTCCTC TGCGGCCGAC GGCGACCTCA CCGTCCGCGT CGACACCGAG
AGCATGAACG ACGCGATGAG CGAGGTCGGC GAGGAGATCA ACGCCATGCT GGCGGATCTC
TCTACGACCA TCGCCGAGAT GAAGTCCTTC GCGAGCAACG TGTTGCAGGC GAGCGACGAC
GTGGGGACGA ACGCCCAGCG GGTCGACCGG GCCAGCCAGC AGGTCAGCGA GTCGATCCAG
GAGATCTTCG ACGGGACGAA CGAACAGAGC GAACGACTCC AGAACGCGGC CTCGGAGATG
GAGAACCTCT CTGCGGCCTC CGAGGAGATG GCGGCGTCGG CCCAGCAGGT GGCCGACACG
TCCCAGTCGG CCGCCGAGGT CGGCGAAGAC GGCCGTAGTG CGGCCCAGGA GGCCATCGAG
GAGATGAACA GCATCGAGGC CGAGACCGAG GAGACCGTCG CCGAGATCAA CGCGCTCGAC
GAGGATCTCG ACGAGATCGG CGAGATCGTC TCGGTGATCA CCCAGATCGT CGAGCAGACC
AACATGCTCG CGCTCAACGC CTCGATCGAG GCGGCCCACG CCGACGCGGA GGGCGCGGGC
TTCGCCGTCG TCGCAGACGA GATCAAGGGC CTCGCCGAAG AGACCAAAGA GGCCGCGGGG
GACATCGAGG AGCGCATCGA GCGCATCCAG TCACAGGCCG GCGACACCGT CGAGACGATG
GAGTCGACCA GCCAGCGGAT CACCGACGGC GTCGAGACCG TCGAAGAGGC CGTCAACGCC
CTGGAGACCA TTGTCGAGTA CACGGAGGAG GTCGACGCCG GTATCCAGGA GATCGACCGG
GCGACCGAAG AGCAGGCAGA GACGGCGACG GAGCTGCTGG AGATGATCGA CAAGCTGACC
GAGATCAGCC AGGAGACCGC GACGGAGGCG GACACGGTCG CCGGTGCGGC CGAGGACCAG
GCACACTCCA TCGGCGAGGT GTCTGACTCC GCGACGGAAC TCAGACAGCG TGCAGACGAA
CTCGAACAGG CGCTCGACCG GTTCTCGGTG CAGTCTGCCG AGAGTCCCGG CCAGCAGACG
ACTGCGGCCA CTGACGACGA CTAA
 
Protein sequence
MSSETSSLLP EFIGDSYALR LGLALALAVI VVIAVGAVVS VQASDELESD VASDLRATSA 
TQADQIDAWL ESARQSVRMT SALPVFESGS TSEIQAQLNT LQDNDRLPAD VVAVHYVDTT
TMEIEASSNE DFVGVDASEQ GAPFATDPPS FEGPDDTHVT DPFQVSIVDH PIIAVLSPVE
GDSDHAIVFM TDLKERTEAF SDQRDGSYTA VVNDDGQYIA HPNSSKINTA HDGSMTMPAS
GESGFVAMGD TLMGMTTLET ADWTVMVHSD RSEAYALSSQ INSDLIGIVL FAVINLGLVG
VTIGSGTIVS LRRLSNRAEE MGAGDLDVDL TTARTDEIGS LYQSLDDMRT NLRETISDAE
EARREAEQAK SDAQQAREDA EEEQAEMEAL TGHLELKATE YSDALSSAAD GDLTVRVDTE
SMNDAMSEVG EEINAMLADL STTIAEMKSF ASNVLQASDD VGTNAQRVDR ASQQVSESIQ
EIFDGTNEQS ERLQNAASEM ENLSAASEEM AASAQQVADT SQSAAEVGED GRSAAQEAIE
EMNSIEAETE ETVAEINALD EDLDEIGEIV SVITQIVEQT NMLALNASIE AAHADAEGAG
FAVVADEIKG LAEETKEAAG DIEERIERIQ SQAGDTVETM ESTSQRITDG VETVEEAVNA
LETIVEYTEE VDAGIQEIDR ATEEQAETAT ELLEMIDKLT EISQETATEA DTVAGAAEDQ
AHSIGEVSDS ATELRQRADE LEQALDRFSV QSAESPGQQT TAATDDD