| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hmuk_2660 |
|---|
| Symbol | |
|---|
| ID | 8412210 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halomicrobium mukohataei DSM 12286 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013202 |
|---|
| Strand | + |
|---|
| Start bp | 2549264 |
|---|
| End bp | 2550028 |
|---|
| Gene Length | 765 bp |
|---|
| Protein Length | 254 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 645021005 |
|---|
| Product | transcriptional regulator, DeoR family |
|---|
| Protein accession | YP_003178473 |
|---|
| Protein GI | 257388700 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
|---|
| COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.360297 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCCAG CCGAGCGCAA GCGGCGGATC GTCGAACTCG TCACGGAGCG TGACGGCTGT
TCTGTCGCCC GACTCGCGAC CGAACTCGAC TTCTCGAAAG CGACGATCCG GCGCGACCTA
CAGGAGCTCG AAGACGACGG CCGGATCGAA CGATCACACG GCGGTGCCGT CCCTGCGTCG
TCGGTCGGAC AGGAGCGCCC GTACGGCCAG CGCGAAGTCG ACCGACTGGA CGCCAAACAG
GCCATCGCCG CCCGCGCGGT CGACCTGTTG CAGGACGCGC AGGTGGTGTC GTTCGACGCC
GGGACGACGA CGATGGCCGT CGCACGTGCG CTGCCCAGCG AGGCCGGCGT CGAGGCGGTG
ACGAACATGC CGGATCTGGC GACGACCCTG CTGGACAAAG GCATCGAGGT GACGGTGACC
GGCGGGACTT TGCGCCGCCG GACTCGGGCG CTGGTCGGTC CGACCGCCCA GCGGTTCCTC
GACGACCACC ACGTCGACCT GCTGTTCGTC GGGACGAACA GCATCGACGC GACGGCCGGG
CTGACGACCC CCAACGAGGC CGAGGCCGCT GTCAAGTCCC GGTTCGTCGA GCAGGCCAGC
CGCGTCGTGC TCGTCGCTGA CAGCTCGAAG TTCGACGAGC AGTCGTTCGT CACCGTCGCC
GCCCTCGACG CGGTCGACAC GCTGGTGACC GACCGCACGC CGGACGGTGC GCTGGCCGCC
GCCCTCGACG AGGCCGACGT GACCGTCCTG GAGGCAGACG CGTGA
|
|---|
| Protein sequence | MLPAERKRRI VELVTERDGC SVARLATELD FSKATIRRDL QELEDDGRIE RSHGGAVPAS
SVGQERPYGQ REVDRLDAKQ AIAARAVDLL QDAQVVSFDA GTTTMAVARA LPSEAGVEAV
TNMPDLATTL LDKGIEVTVT GGTLRRRTRA LVGPTAQRFL DDHHVDLLFV GTNSIDATAG
LTTPNEAEAA VKSRFVEQAS RVVLVADSSK FDEQSFVTVA ALDAVDTLVT DRTPDGALAA
ALDEADVTVL EADA
|
|---|
| |