| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hmuk_2446 |
|---|
| Symbol | |
|---|
| ID | 8411990 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halomicrobium mukohataei DSM 12286 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013202 |
|---|
| Strand | + |
|---|
| Start bp | 2347968 |
|---|
| End bp | 2348759 |
|---|
| Gene Length | 792 bp |
|---|
| Protein Length | 263 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 645020787 |
|---|
| Product | ribonuclease BN |
|---|
| Protein accession | YP_003178261 |
|---|
| Protein GI | 257388488 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1295] Predicted membrane protein |
|---|
| TIGRFAM ID | [TIGR00765] YihY family protein (not ribonuclease BN) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 0.805614 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.00565169 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTCGATCG TTCGTTCGGT TGTCACGCTC GCTCGCGACC GGAACGTTAC GTTCCTCGCG
GCGGGCATCG CCTACTACGC GTTCGTGTCT ATCGTTCCCC TGCTGCTCCT GGCGATCGCC
GTCGCCTCGA CGCTCGGCGG CCAGGCGTTC GCAGACCGGG TCGTCGCAGT GCTGGGCCGG
ATGCTCTCGG CGTCGGGCCA GGACCTCGTG ACGGGTGCAC TCACCGACAC CGCCGGGCGG
GGGACGGCCT CGCTGGTCGG CTTCCTGGTG TTGCTCTGGA GCGGACTGAA GCTCTTTCGT
GGACTCGATC AGGCGTTCGA CGAAGTGTAC GCCGCCGAGG TCCACACGTC GCTCCTCCAG
CAGGTGCGGA ACGGACTGGT CGTCGTCGTC GGCATCGCAC TCGCGGTCGG GACCGCGGTC
CTCGTCGGTA TCGCGCTCTC GATCCAGCCC TGGGAAATCC CGCTCGTCAA CGTCTTCGGG
ACCGTCGCGC TCGTCGTCGT CATCACCCTC GCCTTCCTGC CGATCTACTA CGTCCTGCCG
CCGGTCGACG TGTCGCTGCG AGAGATTCTC CCCGGCGCGG TGATCGCTGC TGGCGGGTGG
GTCCTGCTCC AGCTCGGATT TCGCATCTAC GCGGCCAGTG CCGGGCAGTA CGCTGCCTAC
GGTATCCTCG GGGCCGTCCT GCTGTTCGTC ACGTGGCTGT ACTTCGCGAG CATCGTCGTC
CTGATCGGCG TCGTCGTCAA CGTCGTCTTG CGGGAAGCCG GGATCGGTTC CTCGTCGGAG
CCGGCCGGGT AG
|
|---|
| Protein sequence | MSIVRSVVTL ARDRNVTFLA AGIAYYAFVS IVPLLLLAIA VASTLGGQAF ADRVVAVLGR
MLSASGQDLV TGALTDTAGR GTASLVGFLV LLWSGLKLFR GLDQAFDEVY AAEVHTSLLQ
QVRNGLVVVV GIALAVGTAV LVGIALSIQP WEIPLVNVFG TVALVVVITL AFLPIYYVLP
PVDVSLREIL PGAVIAAGGW VLLQLGFRIY AASAGQYAAY GILGAVLLFV TWLYFASIVV
LIGVVVNVVL REAGIGSSSE PAG
|
|---|
| |