Gene Hmuk_2424 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_2424 
Symbol 
ID8411968 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp2322894 
End bp2325323 
Gene Length2430 bp 
Protein Length809 aa 
Translation table11 
GC content66% 
IMG OID645020767 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_003178241 
Protein GI257388468 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.052407 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTGG GCACCAAACG GTTCCTCGCT GCGGTCGAGC GATCGCTTCC CGACGTTGTC 
AGGCGACGCT ACGCCGCGAA GTTCGGCGTG TTGCTGTTGG GTGTCGTCCT CGTCCTCGCG
GCCGGGGGCG GACTCGTCAT CCTCGAAACC GAGTCGCTCG TCGAGTCCCA GACCGAAGAG
CAAATCGTCG GCGTCGCGGA GTCACAGGCG TCGTCGACCT CGGAGTGGGC GTCAACTAAA
CAGTCGACAA CGTCGTTCCT CGCAGATTCG CTGGCGGACC GAGCCGACGA AACCGCCGCC
GACAACCAGC GCTGGCTCGA ACAGAAGCTC ATCGGACTGC CAGGCGACGT TCGAGCGCTT
CACTACGTCG ATACTGCTGA CGGATCCGTC GTCGCGAGTA CCGACGACGA CCTCCAGGGC
ACGTCGCTCG CCGCAGTCGA GGCACCCTGG ACAGACAGTA GCGGCGCAGT CGTCACCTCG
GGTCCGACCT CGACCTCCCA GCCCTACGAG AGCGGGAGCG ATTCGGTCAT CGCGTTCGTC
CAGCAGATCC CCGGAGACGA CGGGGTCGTG GTACTCACCG CGTCGCTCGA AGCGCGATCC
CACGAGTTCA CGTCGCCGTT CGCGACCGGC GACGTGAAGG TCGTCAGCCA GGACGGTCGA
ATCATTCTGG ACAACCGGAA AGGCTCGCTC CTCGAACAGT ACGAGGCGGC CGACGGCTCG
ACCGAGACGG CCGTCGAGGC GGCCCTCGGC GGCGAGACCG GATACAGACA GGTCTCGGCC
CGGACCGGCA TGGACGAGGG ACAGTACGTC ATGGCGTACA CGCCGATCAC CGGCACGGAG
TGGGCGTTGC TCTACCACGT CCCGACCGAC CGCGCGTTCG CGCTCCAGTC GGCGGTCTCC
GAGAACATCG GCCTCCTCCT GGCGCTTGCG GTCGGCGCGC TGTTCGTCGT CGGAGCGACG
ATCGGCCGGG GAACTGCCCG TTCGCTCGCC CACGTAGCCG AGAGCGCGGA GGACATCGCT
GCGGGTGAGA TCAACAGTAC GATCCCCGAG ACCGACCGCA TCGACGAGAT GGGGCAGCTG
TACGACGCCT TCGCCGCGAT GCAGGCGTAC CTGACGACCG CCGCCGACCA GGCGGACGCG
ATCTCCGAGA AGCGGTTCGA CGACCCCGCG CTCGACGAGG AGATCCCCGG CGAGTTCGGT
GCGGCACTGG AGAAGATGAG CGTCGACATC CAGGAACTGA TCGCCAACAT CGAGGAGGCC
AAAGACGAGG CGGAGTCCGC ACAGGCAGAG GCCGAGTCGA TGGCGACCGC CCTCGAAGCG
AAGGCGGAAC AGTTCAGCGA CGTGATGGAC AGTGCCGCGG CCGGCGACCT CACTCAGCGG
ATGGACACCG ACAGCGACTA CGACGCGATG GTCGACATCG CAGAGAGCTT CAACGAGATG
GTCTCGGAGC TCGAACGGAC CGTCGTCCGC ATCGAGGAGT TCGCCGGGAC CGTCGACTCC
TCGACGGAGT CGATCTCCGC GAGCGCACAG GAGGTCAAGT CCGCGAGCGA ACAGGTCAGT
CGATCCGTCC AGCAGATCGC GGAGGGCGCA GACCGGCAGA ACGAGCACAT CCAGCAGGTC
AGCGGCGAGA TGACGGACCT CTCGGCGACC GTCGAAGAGA TCACGTCCTC GACCGACGAG
GTCGCCTCGA AGTCCCAGCG CGCCGCCGAA ACCGGTTCTG AGGGGCGCGA ATACGGGCAG
CTGGCCGCAG ACGAGATCGA AGCGATCGAC GAGACGGCGA CAGAGGCCGT CGAGCAAGTC
GAGTCTCTCG CCTCGGAGAT GGAGCGGATC GGCGAGGTCG TCACGCTGAT CGACGACATC
GCCGACCAGA CGAACATGCT GGCGCTGAAC GCCTCTATCG AAGCCAACAG AGCCGGCGAG
GCCGGCGAAG GGTTCGCCGT CGTGGCCCGC GAGATCAAGG CGCTGGCGGA GGAGACCCAG
GACGCGACCA ACGACATCGC GTCGCTGATC GAGAACATCC AGTCCCGGAC GGACAACACC
GTCGACGACA TCCGCGAGAT GGGCGACCGC GTCGACAACG GCAAGGAGAC CGTCGAAAAC
GCCACGGAAG CCCTCTCGGA GATCGTCACG CAGGTCGAGG ACGCCAACTC CGGGATTCAG
GCGATCAGTG ACGCGACCGA CGAACAGGCG GCCTCCATGG AGGAGGTCGT CTCGATGGCC
GAGGAGGTCG GCTCGATCAG CGAAGAGACG TCCTCGCAGT CGGAGAACGT CGCCGCGTCG
GCCGAGGAAC AGGCCGCGTC GATCTCCGAA GTCACGAGCA GCATCCAGTC GCTGTCGAGC
CAGGCGAGTG ACCTGAAGGA ACTGGTCAAC CAGTTCGACA CCGACGCCCG AAACACCACC
GGCGAAGTGT CGGCCGCGTC GGACGACTGA
 
Protein sequence
MSLGTKRFLA AVERSLPDVV RRRYAAKFGV LLLGVVLVLA AGGGLVILET ESLVESQTEE 
QIVGVAESQA SSTSEWASTK QSTTSFLADS LADRADETAA DNQRWLEQKL IGLPGDVRAL
HYVDTADGSV VASTDDDLQG TSLAAVEAPW TDSSGAVVTS GPTSTSQPYE SGSDSVIAFV
QQIPGDDGVV VLTASLEARS HEFTSPFATG DVKVVSQDGR IILDNRKGSL LEQYEAADGS
TETAVEAALG GETGYRQVSA RTGMDEGQYV MAYTPITGTE WALLYHVPTD RAFALQSAVS
ENIGLLLALA VGALFVVGAT IGRGTARSLA HVAESAEDIA AGEINSTIPE TDRIDEMGQL
YDAFAAMQAY LTTAADQADA ISEKRFDDPA LDEEIPGEFG AALEKMSVDI QELIANIEEA
KDEAESAQAE AESMATALEA KAEQFSDVMD SAAAGDLTQR MDTDSDYDAM VDIAESFNEM
VSELERTVVR IEEFAGTVDS STESISASAQ EVKSASEQVS RSVQQIAEGA DRQNEHIQQV
SGEMTDLSAT VEEITSSTDE VASKSQRAAE TGSEGREYGQ LAADEIEAID ETATEAVEQV
ESLASEMERI GEVVTLIDDI ADQTNMLALN ASIEANRAGE AGEGFAVVAR EIKALAEETQ
DATNDIASLI ENIQSRTDNT VDDIREMGDR VDNGKETVEN ATEALSEIVT QVEDANSGIQ
AISDATDEQA ASMEEVVSMA EEVGSISEET SSQSENVAAS AEEQAASISE VTSSIQSLSS
QASDLKELVN QFDTDARNTT GEVSAASDD