Gene Hmuk_2400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_2400 
Symbol 
ID8411944 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp2304371 
End bp2304850 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content68% 
IMG OID645020743 
ProductRibonuclease P-related 
Protein accessionYP_003178217 
Protein GI257388444 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1369] RNase P/RNase MRP subunit POP5 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACACC TCCCCAAACA CCTACAGCCC CGGTGGCGCT ACCTCGGGGT CGAGATCGAG 
AGCTGGCCCG ACGCCGACTT CGGCCGCAGG ACTCTCCAGC GGGAACTGTG GTACGCCGCC
CAGAACCTCG TGGGCGACGC CGGCAGTGCC GACCTCGATC TCACCGTGCT CCGCTTCGCG
TTCGAGGACG GCCTGGGGAG CGCGCTCGTC CGGACGCGGC GCGACCGGAC CGACAGCGCA
CGTGCCGTGA TCGCCTCGCT GTCGACGATC GACGACGACC CGGTCGGCGT CCGGGTCCGT
GGCACGAGTG GCACCGTCCG TGCGTGTGAG GAAAAATATA TACGACGCGC ATCGGAACCG
TCCGAACAGA GACAGGTCGC GTTCGACGGC GACGAGCGGA CCGCAGTCGT CCGTGACGGC
CGTGTCGACG TTGCCACCGA CGACGGATTT TCGGGCGCGA CCGACCTCGA TCTCCAGTAA
 
Protein sequence
MKHLPKHLQP RWRYLGVEIE SWPDADFGRR TLQRELWYAA QNLVGDAGSA DLDLTVLRFA 
FEDGLGSALV RTRRDRTDSA RAVIASLSTI DDDPVGVRVR GTSGTVRACE EKYIRRASEP
SEQRQVAFDG DERTAVVRDG RVDVATDDGF SGATDLDLQ