Gene Hmuk_2067 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_2067 
Symbol 
ID8411603 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1977808 
End bp1979772 
Gene Length1965 bp 
Protein Length654 aa 
Translation table11 
GC content66% 
IMG OID645020406 
Product3-hydroxyacyl-CoA dehydrogenase NAD-binding 
Protein accessionYP_003177887 
Protein GI257388114 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTTTG AGGACATTGA GACTGTGGCG GTGCTTGGCG CAGGAAATAT GGGTCACGGA 
ATCGCCGAGG TCGCCGCCAT CGCAGGCTAC GACGTGCAGA TGCGCGACAT CAAAGAGGAG
TTCGTCCAGG ACGGGTACGA CAACATCGAG TGGTCCCTCG ACAAACTCGC GGAAAAAGAA
CAGCTCAGTC AGGACGAAGC CGACGCGGCC CTGGAACGCG TGACACCGCT GGTCGACATG
GAGGCGGCCG TCGGCGACGC CGACGTGGTC ATCGAGGCCG TCCCGGAGAA AATGGAGATC
AAGAAAGACG TCTACGGCGA CGTGGAAGCC TACGCCCCCG AGGACGCGAT CTTCGCGACG
AACACGTCGA GCCTCTCGAT CACGGAGCTG TCCGAAGTCA CGGAGCGTCC AGGGCAGTTC
TGCGGGATGC ACTTTTTCAA TCCCCCGGTT CGGATGCCCC TCGTCGAAGT CATCTCGGGG
GAACACAGCG ACGACGAGAC GCTCGACGCG ATCGAAGCGC TCGCCGAAGC CTTCGACAAG
ACCCCCGTTC GCGTCCGCAA GGACTCTCCC GGATTCATCG TCAACCGCAT CCTCGTGCCA
CTGATGAACG AGGCCTGCTG GCTCGTCCAC GACGACGTGG CGACGATCGC CGAGGTCGAC
TCGACGACGA AGTTCGACAT GGGCCTGCCG ATGGGTTCGT TCGAGCTCTC GGACCAGGTC
GGCAACGACG TGGGCCTGCA CGTCCTCGAA TACATGCACG AGGTGCTCGG TGAGCAGTAC
GCACCGTGTC CGCTGCTCGA AGAGGCGGTC GAAGACGAGC GGCTCGGCAA GAAGTCCGGC
GAAGGGTTCT ACGACTACGA GAACGGCGGC GTCGACATCC CGACGGACGC CGGCCGCGAG
GACGTCGAAC ACCGTCTACT GGCCGTGATG GCCAACGAGG TCGGGAAACT GGTCGAAAAC
GACGTCGCGC CCGTCGGCGA CATCGACGAG GCCGTGATGC TCGGCGGCGG CTTCCCGGAC
GGGCCGGCGA AGCTCGCAGA CGAGGCAGGG CTGGAGGCGC TCGTCGACGC GCTCGAAACG
GCCCGCGAGG AGACCGGTGC AGCCCGCTAC GAACTCTCGG CGGGCCTCGA AGCGGCCGCT
CGGGAGGGTG GCTTCTACGA CGACGAGGAA GCGGAGTCGA CCGACTACGA ATCGATTTCG
CTGTCCTACC CCGAGGAGTA CGTCGCACAG ATCGAACTCG ATCGCCCACA CCGAATGAAC
ACGGTCAGTC CGGACATGAT GGACGAGATC GCCGACGCCG TCGATCACCT CAGCGAGGAC
GACGAGGTGC GGGCGATCCT GCTGACCGGC GCGGGCGATC GGGCCTTCTC TGCGGGCGCG
GACGTACAGT CGATGGCGAG CAACGCGACG CCGCTGGAAG CGATCGAGCT CTCCCGGAAA
GGCCAGCAGA CGTTCGGCAA GCTCGAATCC TGTCCGATGC CGGTCGTGGC CGGCATCGAC
GGCTACGCGC TGGGCGGTGG GATGGAACTG GCCACCTGTG CGGACATGCG CGTCGCCAGC
GAGCGCTCCG AACTCGGCCA GCCCGAACAC GACCTCGGCC TGCTGCCCGG CTGGGGCGGC
ACCCAGCGCC TGAGCAACAT CGTCGGCGAG GGCCGCGCCA AGGAGATCAT CTTCACGGCC
GAGCGCTACG ACGCCGAAGA GATGGCCGAC TACGGCTTCG TCAACGAGGT CGTCCCCAAC
GACGAGATCG ACGAGCGGGC GCTCGAACTG GCCGCCGACC TGGCCGCCGG ACCGCCCGTC
GCCCAGGAGC TGACCAAGAA GGCGATGCTG GCCGGGCGCG ACGACACCGA CGCCGGACTG
GAGGTCGAGG CCCAGGCCTT CGGCCACCTC ATCGGCACCG ACGACGTGAT GGAGGGCATC
ACGGCGTTCA TGGGTGACGG CGACCCGGAC TTCCAGGGCA AGTAG
 
Protein sequence
MDFEDIETVA VLGAGNMGHG IAEVAAIAGY DVQMRDIKEE FVQDGYDNIE WSLDKLAEKE 
QLSQDEADAA LERVTPLVDM EAAVGDADVV IEAVPEKMEI KKDVYGDVEA YAPEDAIFAT
NTSSLSITEL SEVTERPGQF CGMHFFNPPV RMPLVEVISG EHSDDETLDA IEALAEAFDK
TPVRVRKDSP GFIVNRILVP LMNEACWLVH DDVATIAEVD STTKFDMGLP MGSFELSDQV
GNDVGLHVLE YMHEVLGEQY APCPLLEEAV EDERLGKKSG EGFYDYENGG VDIPTDAGRE
DVEHRLLAVM ANEVGKLVEN DVAPVGDIDE AVMLGGGFPD GPAKLADEAG LEALVDALET
AREETGAARY ELSAGLEAAA REGGFYDDEE AESTDYESIS LSYPEEYVAQ IELDRPHRMN
TVSPDMMDEI ADAVDHLSED DEVRAILLTG AGDRAFSAGA DVQSMASNAT PLEAIELSRK
GQQTFGKLES CPMPVVAGID GYALGGGMEL ATCADMRVAS ERSELGQPEH DLGLLPGWGG
TQRLSNIVGE GRAKEIIFTA ERYDAEEMAD YGFVNEVVPN DEIDERALEL AADLAAGPPV
AQELTKKAML AGRDDTDAGL EVEAQAFGHL IGTDDVMEGI TAFMGDGDPD FQGK