Gene Hmuk_1996 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1996 
Symbol 
ID8411525 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1900662 
End bp1901765 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content68% 
IMG OID645020328 
Productglycosyl transferase group 1 
Protein accessionYP_003177816 
Protein GI257388043 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0691436 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACTGC CGCGCGTGGC TGCGTTCACC GACACATACC TCCCGACGGT CAACGGCGTC 
ACCTACACTG TCAAGACCTG GCGAGAGCAG TGGACGCGCC GCGACAGCGA GATGGACGTG
ATCTATCCCC GGAGCGAACA CCAGGCGACG GCCGGCGAAC ACCCGGTGTC GAGCCTCCCG
TTCCCGTTCT ACGAGGGCTT TCGCGTCGCG GCACCGCAGA TCCCGACGGC CGTCGAGGCG
GCCGACGTGG TCCACGCACA CACCCCGTTC AGTCTCGGGC TGGCCGCAAA GCGGTTCGCC
CGGAGCAACG ACGCGCCGCT GGTGGCGTCT TACCACACGC CGACCGGCGA GTACGCCGAG
TACGTCTCCC TCAACGGCAC CATCGAACGA CTGATTCGCA ACTGCGCGAC CCGCTACGAG
CGGTGGTTCC TGAACGGTGC CGACGTGGTC ATCACGCCCA GCGAACGGAC CGCTCGACAC
CTCCGGGAGA CCGTCGGCGT CTCGACGCCG GTGAAAGTGC TCGCGAACGG CGTCGACACC
GACTTCTTCG CACCGATGGA GACGGCGGCG TTTCGCGAGC GGCACGGTCT TCCGGACGGC
CCGCTGGTGG GATACACCGG GCGCCACGGC TACGAGAAGT GCCTCGACGA CATCGTCGCC
GCCGCTGAGG GACTGGACGT GACGCTGGTC TTCGGCGGCG ACGGACCCGC TCGCGAGGAC
CTCGAAGCGA CGGCCGAGGC GGCAGACGTC GACGCCCACT TCCTGGGGTT CCTCGACCGA
GCGGAGCTTC CCGAGCTGTA CGCCGCACTC GACGTGTTCG CGTTCCCCAG CCCGGTCGAG
ACCCAGGGAC TGGTCGCGCT GGAGGCAAAC GCCTGTGGGA CGCCGGTCGT CGGGGTCGAC
AGCGGTGCGC TGAGTGGCAC GATCGACGAC GGCGTCACCG GCTACAAGTA CCCCGAGGGC
GACACTAACG CCTTCGGCGA CGCGATCGAG CGGGCGCTCG ACGAGTCCGA ACGACTCCGA
GAGCGCTGTC TGGACCGCCG CGGGGAGACG AGCGTCGAAC ACTCCGTGGA ACGACTGGCG
GACATCTACG AACAGGTCAT CTGA
 
Protein sequence
MALPRVAAFT DTYLPTVNGV TYTVKTWREQ WTRRDSEMDV IYPRSEHQAT AGEHPVSSLP 
FPFYEGFRVA APQIPTAVEA ADVVHAHTPF SLGLAAKRFA RSNDAPLVAS YHTPTGEYAE
YVSLNGTIER LIRNCATRYE RWFLNGADVV ITPSERTARH LRETVGVSTP VKVLANGVDT
DFFAPMETAA FRERHGLPDG PLVGYTGRHG YEKCLDDIVA AAEGLDVTLV FGGDGPARED
LEATAEAADV DAHFLGFLDR AELPELYAAL DVFAFPSPVE TQGLVALEAN ACGTPVVGVD
SGALSGTIDD GVTGYKYPEG DTNAFGDAIE RALDESERLR ERCLDRRGET SVEHSVERLA
DIYEQVI