Gene Hmuk_1806 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1806 
Symbol 
ID8411332 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1727283 
End bp1727906 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content63% 
IMG OID645020136 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003177627 
Protein GI257387854 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.382485 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGGACT GGCTATACGT TATAGCAATG GCCGAACCGC CGGACCGATC ACTCTCGGAG 
TCGGACGAAG CGATCATGCG CGCGACCTAT CGCGCGCTCC GAGACCACGG CTACGCCGAC
CTGACGATCA AGCGCATCGC GGAGGAGTAC GGCAAGACGA CTGCCGCCGT ACATTACCAC
TACGAGACGA AAGAGGACCT CCTCGCGGCG TTTCTGGACT ACATCCTCGA TCAGTTCGCG
GCGGCAGTCC ACGACGTGGA GACGACGGAC CCCGAACAGC GGCTCGACTT ACTGATCGAT
AAGTTGATCG CCGACGCGGA GGACCACCAG GATCTGCTGA TCGCGATGCT GGAGATGCGC
AGCCAGGCAC CCTACAACGA GACGTTCGGC GAGCGGTTCC AGCAAAACGA CGAGTACGTC
CGCTACATGC TCCGGACGGT GATCGACCAC GGCGTCAGGG AAGGGGTCTT CTCGCCGGTC
GACTCCGAAC ACGTCGCACG CGCGCTCATG ACGATCGTCG ACGGCGCTCG CACCCGAGCG
GTCGTCCTCG ACGAGGAGGA CACCCTGGCG ACCGCACGCC AGACGGCAGC CGAGTACGTC
GACGCCGTGT TGCTCGACGA CTGA
 
Protein sequence
MRDWLYVIAM AEPPDRSLSE SDEAIMRATY RALRDHGYAD LTIKRIAEEY GKTTAAVHYH 
YETKEDLLAA FLDYILDQFA AAVHDVETTD PEQRLDLLID KLIADAEDHQ DLLIAMLEMR
SQAPYNETFG ERFQQNDEYV RYMLRTVIDH GVREGVFSPV DSEHVARALM TIVDGARTRA
VVLDEEDTLA TARQTAAEYV DAVLLDD