Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hmuk_1806 |
Symbol | |
ID | 8411332 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halomicrobium mukohataei DSM 12286 |
Kingdom | Archaea |
Replicon accession | NC_013202 |
Strand | - |
Start bp | 1727283 |
End bp | 1727906 |
Gene Length | 624 bp |
Protein Length | 207 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 645020136 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003177627 |
Protein GI | 257387854 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 45 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.382485 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGGGACT GGCTATACGT TATAGCAATG GCCGAACCGC CGGACCGATC ACTCTCGGAG TCGGACGAAG CGATCATGCG CGCGACCTAT CGCGCGCTCC GAGACCACGG CTACGCCGAC CTGACGATCA AGCGCATCGC GGAGGAGTAC GGCAAGACGA CTGCCGCCGT ACATTACCAC TACGAGACGA AAGAGGACCT CCTCGCGGCG TTTCTGGACT ACATCCTCGA TCAGTTCGCG GCGGCAGTCC ACGACGTGGA GACGACGGAC CCCGAACAGC GGCTCGACTT ACTGATCGAT AAGTTGATCG CCGACGCGGA GGACCACCAG GATCTGCTGA TCGCGATGCT GGAGATGCGC AGCCAGGCAC CCTACAACGA GACGTTCGGC GAGCGGTTCC AGCAAAACGA CGAGTACGTC CGCTACATGC TCCGGACGGT GATCGACCAC GGCGTCAGGG AAGGGGTCTT CTCGCCGGTC GACTCCGAAC ACGTCGCACG CGCGCTCATG ACGATCGTCG ACGGCGCTCG CACCCGAGCG GTCGTCCTCG ACGAGGAGGA CACCCTGGCG ACCGCACGCC AGACGGCAGC CGAGTACGTC GACGCCGTGT TGCTCGACGA CTGA
|
Protein sequence | MRDWLYVIAM AEPPDRSLSE SDEAIMRATY RALRDHGYAD LTIKRIAEEY GKTTAAVHYH YETKEDLLAA FLDYILDQFA AAVHDVETTD PEQRLDLLID KLIADAEDHQ DLLIAMLEMR SQAPYNETFG ERFQQNDEYV RYMLRTVIDH GVREGVFSPV DSEHVARALM TIVDGARTRA VVLDEEDTLA TARQTAAEYV DAVLLDD
|
| |