Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hmuk_1786 |
Symbol | radB |
ID | 8411312 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halomicrobium mukohataei DSM 12286 |
Kingdom | Archaea |
Replicon accession | NC_013202 |
Strand | + |
Start bp | 1707156 |
End bp | 1707863 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 645020116 |
Product | DNA repair and recombination protein RadB |
Protein accession | YP_003177607 |
Protein GI | 257387834 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0468] RecA/RadA recombinase |
TIGRFAM ID | [TIGR02237] DNA repair and recombination protein RadB |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 0.729381 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.0464986 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAGTGAGT ACGTTTCGAC CGGCTGCGCG GAGATCGACG ACCTGCTCGG TGGCGGGTTC GAGCGCGGCG CGGTCACCCA GATCTACGGC CCACCAGCAG CGGGCAAGAC GAACCTCGCG CTCAGTGGCG CGGTCGAGGT GGCGGCCGCC GGTGACTCGG CGCTGTACAT CGACACGGAG GGGCTGTCGG CCGACCGGAT GGAGCAGATC GCTGGCGCAC GCGCCAGCGA GACCGACGAG ACGCTCGCGG CCCTGGCCGA ACGAATCGTC GTCTCCGAGG CGCTCGACTT CGAGGACCAG GAGGTCGCCG TCCAGGACGC CGCAGAGCTG GCCTCGCAGG TCGAGCTGAT CGTCCTCGAC AGCGCGACCG GCTTCTACCG GCTCGAACGG GACGACGGCG ACGGCGGCGA GGCGCTGCGG GACGTGGCCC GCCAGATCAC GCACCTGCTC TCGCTTGCCC GCAAGCACGA TCTGGCCGTC GCCGTCACCA ACCAGGTCTT CGCGGATCCG GACAGCGACG GCACCCGTGC CCTGGGCGGC CACACGCTGA ACCACTGGTC CGGCGCGATC CTCCGACTCG ATCGGTTCCG GGGCGGGAAT CGGAGAGCGA CACTGGAGAA ACACCGCGCC AAGGCCGCGG GCGACACCGC CCAGTTCCGG ATCACCGAGG CCGGTCTGGC CGGCGGACAG GACCGTTCGC TCGATTAG
|
Protein sequence | MSEYVSTGCA EIDDLLGGGF ERGAVTQIYG PPAAGKTNLA LSGAVEVAAA GDSALYIDTE GLSADRMEQI AGARASETDE TLAALAERIV VSEALDFEDQ EVAVQDAAEL ASQVELIVLD SATGFYRLER DDGDGGEALR DVARQITHLL SLARKHDLAV AVTNQVFADP DSDGTRALGG HTLNHWSGAI LRLDRFRGGN RRATLEKHRA KAAGDTAQFR ITEAGLAGGQ DRSLD
|
| |