| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hmuk_1749 |
|---|
| Symbol | |
|---|
| ID | 8411273 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halomicrobium mukohataei DSM 12286 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013202 |
|---|
| Strand | + |
|---|
| Start bp | 1665269 |
|---|
| End bp | 1666597 |
|---|
| Gene Length | 1329 bp |
|---|
| Protein Length | 442 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 645020077 |
|---|
| Product | ABC transporter substrate-binding protein |
|---|
| Protein accession | YP_003177570 |
|---|
| Protein GI | 257387797 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.239653 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.31899 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAACGG ACGACCGTGG TGGCTGCGGT TCGCGGGCGA CGCGGCGGCG TGTACTCGAA
TCTCTGGGTG GGACCGGAGC GGTGGCGCTG GCCGGCTGTC TCGGATCTGA CGGGGCGACG
ACAGAAACCA GCACCGACGA TTCGGTGACG ATCGGACTGT CCTCGCCCGA GTCCGGTCGC
TACTCTCCGA TCGGCGATCA CGAGCGGCGA GGGTTCGAAC TCGCGGTCAC CCATCTCAAC
GAGGGCGGGG GCCTGGTCGG TGGCGATGGG TTCGCTCGTC TCTCAGGGGA CGGCGTGCTC
GGACGGACCG TCGAGACCGC CGTCGCCGAC ACGGAAGGGG ACGCCTCGAC GGCCGAAACG
AACCTCCAGC AGCGACTCGG CGACGACGAG CTGGCCATGT TCACCGGCGG TGTCGCGGGC
AGCGTCGTCA CGACACACCG GGATCTGGCG GACGAACACG AGACGCCGTA CTTCGTCGGC
ACGTCGACGC TGAACCAGCT CACCGGCGAG AACTGCTCGC CACACGTCTA CCGCGAGCTG
TTCAACTCTC GCACGCTGGC CCGTGCCCTC GTCCCGGAAG TCGTCTCCGA CATCGACGGT
GCCCAGTTCT TCTTCCAGGT CACTACCGAC ACGATCGAAG GACGCGACCT CAAGCGGAGC
ATCAACCGCT ACGCGACCGC GAGCGACCTC GACTTGCGGC CCATCGGCAC GACGACGGTC
CGGTCGGGCT CGACCGACTT CGAGCGAGCG CTCTCGGAAG CGTCGAGCAA CAGCGTCGAC
ATCGTCTTCC TCGATCTGTT CGGCCTCGAC GCCGTCAACG CGATCCAGCA GGCCAAAGAG
ATCCTCTCAG AGGATGCAGT CATCGTCGTT CCGTTGCTCA CCCAGTCGGT CTCGGATTCG
CTGGGCGAGC GGGTCGAGGG AGTCTACGGC ACCGTCGGCT GGCACGAGAA CCTCGATACG
CCGCTGTCGA GCAAGTTCGG CGACGCCTAC CAGAACGAGT ACTCGGGAAC GATGAGCACC
ACGGCCCTCG TCCCACCGGG CCCGGCCCAG AACACGTACG GACAGGTCCT GTTGTGGGCC
AGCGCGGCCG AGGCCGCCGG CACGTTCGAC GCGGACGCGG TCCGGTCCGA ACTCGAAGGG
GTCGAGTACG CACTCGGTGC GGGTTCAGAG ACGATGCGGG CCTGCGACCA CCAGGCGATG
CGAGCCGTCC CGGTCGTTCG TGGCAGTACC GGGACGGACT CGGTCGGGAA CTACTTCGAG
CTGTTGAACG GGCGGCGAAA CGTGGAACCC GGCTGTGACG AACCGCCCGC GTCGGCGTGT
GAGCTGTAA
|
|---|
| Protein sequence | MTTDDRGGCG SRATRRRVLE SLGGTGAVAL AGCLGSDGAT TETSTDDSVT IGLSSPESGR
YSPIGDHERR GFELAVTHLN EGGGLVGGDG FARLSGDGVL GRTVETAVAD TEGDASTAET
NLQQRLGDDE LAMFTGGVAG SVVTTHRDLA DEHETPYFVG TSTLNQLTGE NCSPHVYREL
FNSRTLARAL VPEVVSDIDG AQFFFQVTTD TIEGRDLKRS INRYATASDL DLRPIGTTTV
RSGSTDFERA LSEASSNSVD IVFLDLFGLD AVNAIQQAKE ILSEDAVIVV PLLTQSVSDS
LGERVEGVYG TVGWHENLDT PLSSKFGDAY QNEYSGTMST TALVPPGPAQ NTYGQVLLWA
SAAEAAGTFD ADAVRSELEG VEYALGAGSE TMRACDHQAM RAVPVVRGST GTDSVGNYFE
LLNGRRNVEP GCDEPPASAC EL
|
|---|
| |