| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hmuk_1683 |
|---|
| Symbol | |
|---|
| ID | 8411206 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halomicrobium mukohataei DSM 12286 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013202 |
|---|
| Strand | - |
|---|
| Start bp | 1611611 |
|---|
| End bp | 1612111 |
|---|
| Gene Length | 501 bp |
|---|
| Protein Length | 166 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 645020010 |
|---|
| Product | hexapaptide repeat-containing transferase |
|---|
| Protein accession | YP_003177504 |
|---|
| Protein GI | 257387731 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0110] Acetyltransferase (isoleucine patch superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 0.518627 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.557053 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGGAC GCGAAGCGAA GCGGTCGACC GTCGACGACA GCGTCGAACG CCGCGACGTA
CCGGCCGCTG GCTGGTACCA GATACGGAAT CCGATCCGGT TCGGCCTGAC CTACTACGTC
TTCGAACTGT GTAAACACCT GCCACCGATC GCCAAGAACC CGGTCTATCG GGCCTTCGGC
GTCGAGATCG GGTCGGGCTC AGTGCTCGCG CCGGCCGTCG TCGTCGACCC GTTCTTCCCG
GAGAAGATCA CGATCGGCGA GGGATCGCTG ATCGGCTGGG GGACGAAGCT GCTCACCCAC
GAGGGGTACA CCGACGAGTG GCACGTCGGC CCCGTCGAGA TCGGCGACGA CGTGACCCTG
GGACACGGCT CCTCGACGCG GCCGGGCGTG ACGATCGGCG ACGGTGCGAC GGTCGCCGCC
CACTCGTTCG TCAACCGCGA CGTGGCACCG GGCGAGCGCG TCGGCGGGGT CCCGATCGAA
CCCCTCTCCG GCGACGAGTG A
|
|---|
| Protein sequence | MDGREAKRST VDDSVERRDV PAAGWYQIRN PIRFGLTYYV FELCKHLPPI AKNPVYRAFG
VEIGSGSVLA PAVVVDPFFP EKITIGEGSL IGWGTKLLTH EGYTDEWHVG PVEIGDDVTL
GHGSSTRPGV TIGDGATVAA HSFVNRDVAP GERVGGVPIE PLSGDE
|
|---|
| |