Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hmuk_1658 |
Symbol | |
ID | 8411181 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halomicrobium mukohataei DSM 12286 |
Kingdom | Archaea |
Replicon accession | NC_013202 |
Strand | + |
Start bp | 1583696 |
End bp | 1585510 |
Gene Length | 1815 bp |
Protein Length | 604 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 645019985 |
Product | hypothetical protein |
Protein accession | YP_003177479 |
Protein GI | 257387706 |
COG category | [R] General function prediction only |
COG ID | [COG0433] Predicted ATPase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.208487 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCTGATC TCGGGGATTT CACGGAGTTC GACGCCGACG ACAGCGAGTC GTCGACGCCA GCCGACGGAG CGACGGGAGA CGAAGACGGG GCCGCGGCCG ACGAGGACGA GGCCTTCGAG GAGATGGACA TCGAGCCAAG CGGGCGCGAC CGCGGGATCG GCGTCCTCTC GGCCTCGGAG GGGCTGGCGA TCTGCGAGGA CGAGCGCGAG ACCTGCCTGC GGGCGTACGT CACCGTCGGC AACCGCTCGG ACGTGCGCAT CGGCAAGTAC CTGCTCGTCC CCTATCCGGA CGGTGAGCGA CTGTTCTGTC GGATCTCGGC GCTGGAGTAC GCCCAGGAGT TCCGCGCCGA CGACGCGACC GAGATCCACG CGCGCCGCGC CATGCGCTCG GGTGGGATCG ACGAGCAGGA CTTCAAGTTC ATGGCGACGC TGGAGCCCGT CGCCGTCCTC TATGGGACGG GCGACGACAT GAAGCGCCGG ATGACCGACC GCGTGCCAAA GCCCGAGACA GTCGTCCGCC AGGCCACCGA CAAGAGCGAG ATCAAGACCG GGCTGAAGAT CCCCGAGGAC GGCGTCTTCC TCGGGCATCT CTCGGTCGGC GGCGAGAAGG TCCAGACGGC CGCCGAGCCG CCGACGATCG ACTACCGGCT AAAAGACGAC TACGAAGCGG GCGATCCGCT GGTCTTCCGG CACACGCTCG TGGCCGGCGG CACCGGGTCG GGCAAGACCC ACGGCTCGAA GAACATCCTC CGGCAGTACC TCGCCGAGGA CCGAACGTAT CCCATCGAGG GAGAGGACCG CGACGTGTCT CCCTGTCTGG TCATGTTCGA CCCACAGGAC GAGTACGCTC AGATGCACGA CGACGGCGAC CTCCCCGAGG AGTTCCAGCG CCGCTGTGAG CGCGAGGGGA TCGCCTGTGG CGGCCACGAG GACACGACGG CGTTCGTCCC GAAGGTGTCG GGTTCGAGCT ACGCCGCGAG CCACCACCGC GCCGAGCAGG TCGAGTTCAC CATCCCCTTC TCGATGGTCT ACTCGAACCC GTGGCTGATC GCCGGCAGCC AGCTCAACGA CAATCAGTAC AGCGCCCTCC ACTACCTGCT CGACCGGTTC GAGAAGGAGT ACGGCGAGGA CGGGACCTAC GACCAGTTCA CGACGTTCCT CGACGACCCC GCGCTCAAGG AGGAACTCGA CGAGTCCGGC CGCGTCCACG AGGCGACCTT CGACGCCGTC AAGCGCCGGG CCTACGGCTT CGGCGGCGTC TTCGATCAGG ACGCCCGGCC GATCACCGAC ATGGTCAAAC AGTTCGTCCG CTCGGGCGGG ATCAGCGTGG TCCCGACCTA CCACATCAAC GACTCCCGCT CGAAGACGAC GGTCGTGCTG GCGCTGGCCT CGATGCTCGT CGACGAGAAG CTCTCGAACA GCCCGCGCTA CGACCGCATC AAGGAGACGC CGCTCATCCT CGGGATGGAC GAGGCCCACA ACTTCCTGAC CGACGCCGAC AACGTCCAGG CCCGGAAGGT CATCGGGAAG TTCACCGAGG CCGCGAAACA GGGCCGCAAG GAGCGCCTCG GGCTCTTCCT CATCACGCAG GACCCCCAGG ACATCGCTGA TCCCGTCTTC AAACAGATCA ACAGCACCGT CGTCCTCAAT CTGGGCGACG AGGACGCCAT CTCCGCGGTC AACATCCCCG CGAACCTGGA GTCGAAGGTC CCCTACATGG AGAAAGGCCA GATGGTGGTG TACTCGCCGG ACAACTCCGA GCCCGTCGAG ATCCAGGGAC TCGCGACCTG CGTGACCAAG CACGGGCGAG AGTGA
|
Protein sequence | MSDLGDFTEF DADDSESSTP ADGATGDEDG AAADEDEAFE EMDIEPSGRD RGIGVLSASE GLAICEDERE TCLRAYVTVG NRSDVRIGKY LLVPYPDGER LFCRISALEY AQEFRADDAT EIHARRAMRS GGIDEQDFKF MATLEPVAVL YGTGDDMKRR MTDRVPKPET VVRQATDKSE IKTGLKIPED GVFLGHLSVG GEKVQTAAEP PTIDYRLKDD YEAGDPLVFR HTLVAGGTGS GKTHGSKNIL RQYLAEDRTY PIEGEDRDVS PCLVMFDPQD EYAQMHDDGD LPEEFQRRCE REGIACGGHE DTTAFVPKVS GSSYAASHHR AEQVEFTIPF SMVYSNPWLI AGSQLNDNQY SALHYLLDRF EKEYGEDGTY DQFTTFLDDP ALKEELDESG RVHEATFDAV KRRAYGFGGV FDQDARPITD MVKQFVRSGG ISVVPTYHIN DSRSKTTVVL ALASMLVDEK LSNSPRYDRI KETPLILGMD EAHNFLTDAD NVQARKVIGK FTEAAKQGRK ERLGLFLITQ DPQDIADPVF KQINSTVVLN LGDEDAISAV NIPANLESKV PYMEKGQMVV YSPDNSEPVE IQGLATCVTK HGRE
|
| |