Gene Hmuk_1595 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1595 
Symbol 
ID8411117 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1520162 
End bp1521322 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content68% 
IMG OID645019921 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_003177416 
Protein GI257387643 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACACC CACTGCTCCG CGTCGAGAAC CTGCAGACCC ACTTTTTCAC CGAGGACGGC 
GTCGTTCAGG CGGTCGACGG CATCAGTTTC ACCGTCGAGG CCGGCGAGAT CGTCGGTCTG
GTCGGCGAGT CCGGAGCCGG CAAGAGCGTC GCGTCGGCGT CGCTACTCCG GCTGATCGAG
GAGCCGGGCC GGATCGTCGG CGGACGCGTC GAGTTCGACG GCGAGACCCT GTTCGAGATC
GAGACCGACC GCGACGGCAA CCCCGTGCTC GACGAAGACG GGCGACCCGT CGAGACCGAC
GACTCGCTGT CCCGGCGAGA GATGCGCACC CGCATTCGGG GCCGGGAGAT CGCGATCATC
TTCCAGGACC CCATGGAGTC GCTCAATCCC GTCTACACCG TCGGTGGCCA GCTCCGGGAG
TTCATCGAGG TGAACCGCGA TCTGGGCAAG CGGGCCGCCA GAGACGAGGC CATCGAGATG
CTCCGCGAGG TCGGCATTCC CGAAGCTGGG GCCCGGTACG ACGACTATCC ACACCAGTTC
TCGGGCGGGA TGCGCCAGCG GGTGCTGATC GCGATGGCGC TGGCCTGCGA GCCGTCGCTG
ATCGTCGCCG ACGAGCCCAC GACCGCGCTG GACGTGACCG TGGAGGGACA GATCCTCGAC
CTGGTCGCCG ACCTCCAGGA GAGGTACGGA ACCGCGTTCG TCTGGGTCAC CCACGACATG
GGCGTTGTCG CGGAGATCTG CGACCGCGTG AACGTGCTGT ACCTCGGGGA GATCGTCGAG
CAGGCCGGCG TCGACGAACT GTTTTACGAC ACGAGACACC CCTACACCGA GGCGCTCCTG
CGCTCGATCC CCCGACCGGA TCGGACCGTC GAGGAACTGG ACCCCATCGC GGGGGTCATG
CCCGAAGCGA TCGATCCGCC CAGTGGCTGC CGGTTCCACA CGCGCTGTCC CGAGGCTCGC
GAGGCGTGTA CGCAGGTCGA TCCCGACTGC CGCGTGCTGG TAGACGGTGC CCACCCCCAC
CGGTCGGCCT GTCTCAAACA CGACGTGTTC GACGGCGTCG GCTACGAGAC GAGTCCGCCG
CTCGACAACG AGACGCGCAG CGGCGTCGAC GTGACGCTGA CCGGCGACGG GGGCCGACTC
CGAGGTGAGA GCGATGAGTG A
 
Protein sequence
MSHPLLRVEN LQTHFFTEDG VVQAVDGISF TVEAGEIVGL VGESGAGKSV ASASLLRLIE 
EPGRIVGGRV EFDGETLFEI ETDRDGNPVL DEDGRPVETD DSLSRREMRT RIRGREIAII
FQDPMESLNP VYTVGGQLRE FIEVNRDLGK RAARDEAIEM LREVGIPEAG ARYDDYPHQF
SGGMRQRVLI AMALACEPSL IVADEPTTAL DVTVEGQILD LVADLQERYG TAFVWVTHDM
GVVAEICDRV NVLYLGEIVE QAGVDELFYD TRHPYTEALL RSIPRPDRTV EELDPIAGVM
PEAIDPPSGC RFHTRCPEAR EACTQVDPDC RVLVDGAHPH RSACLKHDVF DGVGYETSPP
LDNETRSGVD VTLTGDGGRL RGESDE