Gene Hmuk_1546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1546 
Symbol 
ID8411067 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1475563 
End bp1476909 
Gene Length1347 bp 
Protein Length448 aa 
Translation table11 
GC content71% 
IMG OID645019872 
Productprotein of unknown function DUF92 transmembrane 
Protein accessionYP_003177368 
Protein GI257387595 
COG category[S] Function unknown 
COG ID[COG1836] Predicted membrane protein 
TIGRFAM ID[TIGR00297] conserved hypothetical protein TIGR00297 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACATCTG CTGTCCGGCG GGCCGTCGGG TTCGCGCTGG TCGGGGCCGT GGCGCTCCTC 
GTGCCCCTCG TCGACGGCGT CGAACCGCCG TGGCTGGCGA CGGCGCTCGC GATCGCTCCG
TTCGTGGGGA TCGCGGCGCT CGCACTGACC GTCGTCGACG ACGGTCCGTT GTTCGAGCTG
TTCGCCCGGC CGGGCGACCG CGAGGACCAC ACCCTGTACG GGCTCGCTGG CTTCGCCCTC
TCGATCGCCG GGCTCTCGCT GCTCGCCCTC CAGTTCGGGC TCCCGATGTG GGTGTTCGTC
GCCAGCGTGT TCGTGCTGGC CGGCGGGAAT CTCGGCACGC GGCTGGTCGA GCGCGTGACC
GCCGACGCGG TAGCCGCGAC TGCCGGGTTC GTGACGGCGG GGTTCCTGGC GGCGACCGCC
GGGAGCGCCG TCTCGGCGAT GCTGGCCGGC CGACCGCTGA CGAGTCAGTT CCTCGCGCTG
CTCGCGTTCT ACGCGATCAG CGGCGCTCTG CTGGCGGCGC TGCTGCGAGC GGTCCTGTTC
GAGCGTGACG ACCCGCTGGT GCTGTTCTCG ATCGGGCTGT TGCTGTGGCT GTTCTCCGAT
CTCCCCTTGC ACGACGTGAC GGCGGGGCGT ATCGCCCTCG CGCTGGGCGT GACGGTCGTC
CTCGGCTACG TCTCCTACGC GCTCGATACG GCGTCGCTGC CGGGGATGCT CACCGGCGTC
TTCCTCGGTC TCCTGACGAT CGTCCTCGGT GACTTCCGGT GGTTCGCCAT GCTCATCACC
TTCTTCGGTC TCGGTGGTCT GGCGACGAAG TTCCGCTACG ACGAGAAACT CGATCGCGGC
ATCGCCGAGG AAAACGAGGG CGCTCGGGGC AGCGGCAACG TCCTCGCCAA CTCCATCGTC
GCGCTCGTGG CCGTCCTCGC CGCGGCGGCG AGCCCGAGCC ACACCGGCAT CGATCCGATG
TTGCTGCTGT ACGCCTTCGC GGGCGCGGTC GCCGCCGCGA TGAGCGACAC CTTCTCCAGC
GAGTTCGGCG GCCTCTACGA CAATCCGCGG CTGATCACGA CGCTCCGGCG CGTCGAACCC
GGCACGGACG GCGGCGTGAC CTGGCAGGGT GCCGTCGCCG GGCTGGTCGG CTCGGGCATC
GTCGCCGGCA TCGCTGGCGG GCTGTTCGCG GACATCGGAG CCGTCGGCGC GCTCGTGATC
CTCGGTGCCG GCTTCCTCGG CATGCTGGTC GACAGCTTCC TCGGGGCGAC GGTCGAGGGC
GAGACGGTCG GCAACCAGAG CGTGAACCTG CTGGCCACGC TGGCGGCGGC GGTGGCCGGC
GGACTCGCCT TCCAGCTCGT GCTATGA
 
Protein sequence
MTSAVRRAVG FALVGAVALL VPLVDGVEPP WLATALAIAP FVGIAALALT VVDDGPLFEL 
FARPGDREDH TLYGLAGFAL SIAGLSLLAL QFGLPMWVFV ASVFVLAGGN LGTRLVERVT
ADAVAATAGF VTAGFLAATA GSAVSAMLAG RPLTSQFLAL LAFYAISGAL LAALLRAVLF
ERDDPLVLFS IGLLLWLFSD LPLHDVTAGR IALALGVTVV LGYVSYALDT ASLPGMLTGV
FLGLLTIVLG DFRWFAMLIT FFGLGGLATK FRYDEKLDRG IAEENEGARG SGNVLANSIV
ALVAVLAAAA SPSHTGIDPM LLLYAFAGAV AAAMSDTFSS EFGGLYDNPR LITTLRRVEP
GTDGGVTWQG AVAGLVGSGI VAGIAGGLFA DIGAVGALVI LGAGFLGMLV DSFLGATVEG
ETVGNQSVNL LATLAAAVAG GLAFQLVL