Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hmuk_1512 |
Symbol | |
ID | 8411033 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halomicrobium mukohataei DSM 12286 |
Kingdom | Archaea |
Replicon accession | NC_013202 |
Strand | + |
Start bp | 1439259 |
End bp | 1440977 |
Gene Length | 1719 bp |
Protein Length | 572 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 645019838 |
Product | PAS/PAC sensor signal transduction histidine kinase |
Protein accession | YP_003177334 |
Protein GI | 257387561 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.578551 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.8402 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATCATTC AGTTGGCTGG TGACCTCACC TACGCGGGCT ATCTCCTGGT GTTCGCTGTG GCAACACTGG CCTGCTTCGT GAGCATCGAC CGGGTCCAAC AGCTCGAAGA GCCGGGCACG CGGCGTGGAC TGACGGCGCT GCTCCTGGCC AGCGGCGGCT GGGCGCTCTC GTATCTGGGC TACTTCCTCG TGCCAGACCC CCAGCTCAAA ACCGCGTTCT ACGTCGCCGG CCTCGTCGTC GGCCTCGCGA CGGTCGGTGC GTGGCTCTAC TTCTGCTCGG CTTTCACCGG TCGGACGCTG CATCGCAGCA CCGGTCTACG ACGCGCGGCC GTCGCGATCT TCCTTGCGAT CGTCGCCGTG AAAGTCACGA ACTATCACGG CCTGTACTTC GCGACCCGGA CAGCGACGGA ACCGTTCCCA CACATGGCGG TGACACACGA GCCGCTGCAC TGGGTCGTCG TCGGACTCTG CTACGCGCTG ACGGCCGTCG GATACTTCAT GCTCTTCGAG CGGCTCCGAC AGGTCAGCTA CCAGACGTGG TCTTTCGGCC TCCTCGTCGG GGTGACGGCT GTTCCTCTCC TGCTCAACCT CGTGGGCCAC GCGACCCCGC TGCTCGCCGA CGTGAGCCAC GAACCCCTCG GTGTCGCGGT CTTCGCCGTC GGCGTCTCGT TCGTCTTCCA CGAGCGGTTT CAGGCGATCG GGCTCGCGGA GGGAGACGAC AAGCCCATCG TCATCGTGAA CGAACGCGAT CAGCTCCGCG AGTACAACGC GGCGGCGGCC GACCTCTTTC CCGCGCTCAC CCGGCCGGAC GTGATCGGGA AACCGCTGTG GAGCGTCGTT CCGTCCGTCG CCGAGGTGCT CGACTCCGAG TCGGGCGTAT TGTCCGTTCG TGACGGCGAG GAAACCCGAT ACTACCAGCT CACCGAGAGC CCGTTCGCGG CCGGACGGTC ACCGGTCGGT CGGCTCGTGC TCTTTACCGA CATCACGGAG CGCGAACGCG ACCGACGCGA ACTCCAGCGC CAGAACGAGC GCCTCGAAGA GTTCGCCAGC GTCGTCTCTC ACGACCTCCG GAACCCCTTG CAGGTCTTGC GGGGCGCGTT CGAGGGGGCT CGCGAGACCG GCGACCCCTC GCACTTCGAC CGCGGGGAGC GAGCGCTCGA CCGGATGGAG ACGCTCATCG ACGACGTGCT CTCGCTCGCC CGGCAGGGCC AGCCCATCGA CGAGACCGAA CCGATCTCGC TCGCGTCGCT GGCGGCGTCG TGCTGGGAGG TCATCGAGGC CGGCGACGCC GATCTCGTCG TCGAAACCGA TCTCGATCTC GTCGCCGATC CCGACCGCTT CCGTCAACTG CTGGAGAACC TCTTTCGGAA CGCGGTCGAA CACGGCGGTG ACGACGTGAC CGTTCGAGTC GGGCGACTAC CGGACGGCAA CGGATTCTAC CTCGCAGACG ACGGTCCCGG CATCCCGGTC GACGAGCGCG AGGCGGTGTT CGAGTCCGGC TACTCGACGA CCGACGGGGG GACCGGCTTC GGACTGGCGA TCGTCAGCGA GATCGTCGAC GCCCACGGCT GGGAGATCAC GGTGTCGGGG CGAGCGGCCG ACGACGCCCC CGACGGACAC ACGGACTCGG AATCCGGTTC GAGAACGGCC ACCGGTGCCT CCTTCGAGAT CACTGGGATC GGTTCTCCAG ACGGCGTCGA CGCGAGCGAA GCGGCTTAG
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Protein sequence | MIIQLAGDLT YAGYLLVFAV ATLACFVSID RVQQLEEPGT RRGLTALLLA SGGWALSYLG YFLVPDPQLK TAFYVAGLVV GLATVGAWLY FCSAFTGRTL HRSTGLRRAA VAIFLAIVAV KVTNYHGLYF ATRTATEPFP HMAVTHEPLH WVVVGLCYAL TAVGYFMLFE RLRQVSYQTW SFGLLVGVTA VPLLLNLVGH ATPLLADVSH EPLGVAVFAV GVSFVFHERF QAIGLAEGDD KPIVIVNERD QLREYNAAAA DLFPALTRPD VIGKPLWSVV PSVAEVLDSE SGVLSVRDGE ETRYYQLTES PFAAGRSPVG RLVLFTDITE RERDRRELQR QNERLEEFAS VVSHDLRNPL QVLRGAFEGA RETGDPSHFD RGERALDRME TLIDDVLSLA RQGQPIDETE PISLASLAAS CWEVIEAGDA DLVVETDLDL VADPDRFRQL LENLFRNAVE HGGDDVTVRV GRLPDGNGFY LADDGPGIPV DEREAVFESG YSTTDGGTGF GLAIVSEIVD AHGWEITVSG RAADDAPDGH TDSESGSRTA TGASFEITGI GSPDGVDASE AA
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