Gene Hmuk_1357 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1357 
Symbol 
ID8410877 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1281605 
End bp1283257 
Gene Length1653 bp 
Protein Length550 aa 
Translation table11 
GC content67% 
IMG OID645019688 
Producthistidine kinase A domain protein 
Protein accessionYP_003177185 
Protein GI257387412 
COG category[T] Signal transduction mechanisms 
COG ID[COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.126794 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGCTC TACTTGGGTT CTCACTGAAG GCCGTGTACG GCGTTTTCTT CCTGGTCGCT 
GCACTCGCCT GTCTCGGGAG TCTCGCCAGA GCGCGGACCG TCGACGACCG AGACACCCGG
TACGGACTGA TCGGACTGTT GCTCACCTCG GGACTGTGGG CGCTGACGTA TCTGGGCATC
ATCTACAGTC CCACGACGGC GCTGAAGGTG GCGTGGTACA CCGCCGGGCT CGTCGTCGGC
TTCGGGACGG TCTTCGCCTG GCTGTACTTC TGCTCGGCCT ACACCGACCG GACCTACCAC
GAGGCCCGCT CGATGCAACT CGTCGGCCTC GGGCTGTACG CCCTGGTCGT GGGGATCAAA
CTCACCAATC CCATCCACGA GCGATACTTC ACGGCCCAGA TGGTGCAGGA GCCGTTCACG
CACCTCGCGA TCCAGCACGG GACGGTCCAC TGGCTGGCGA CCGGGCTGGC GTACGTCCTC
GCGGCCGTCG GCCTGTTCAT GCTGTTCGAG GCCTTCGCCA ACGCGGGGTA CGACACGCGG
TCGCTGGGCG GGCTGACCGC GCTGACGGTG CTGCCGATCG CGCTGGACCT GGTGGCCTTC
GAGTCGACGG CGCTGATCGA CATCATCTAC GCGCCGCTGG GGGTCGCGGC CTTCGCCGTC
GGCGTGTTGT TCTTCGCTCG CGACCGGTTC CTCGCGATCC AGTTGACCGG CGACATCCCC
GAGCCGGTCG TCTTCCTCGA CGAGGACGAT CGGATCAGGG AGTACAACGA CGCCGCGGCC
CGGCTCTTCC CGACGCTGTC GGGGACGCGA GGCCGGTCGG TCACGGCCGC ACTCCCGGTC
GGTCAGGAGC TCTCGGGCCA GGAGATCGTC GCCGTCGAGG GCGACGAGAC GCGGTACTTT
CTGGTCAACG CGAGTCCGCT GACCAGCGTC CAGTCGAACA TCTGTCGGAT GCTCGTGTTC
GTCGACGTGA CCAGACTGGA GCGCCAGCGC CAGGAACTCG AACGCCACAA CGAACAGCTG
GAGGACTTCT CTGCAGGTAT CAGACACGAA CTGCTCAACT CCCTGCAGGT CGTCGGCGGC
CAGGTCTCGG CGGCGGGTAC GGCACTGGAA TCGGGCAACG TCGGGCAGGC TCGCGAGACG
CTGTCGACGG TCTCGCGGCG CGCCCGCGAG ATGGAGACCG TCGTCGACGG ACTGTCGACG
CTGGCTCGCC ACGGCCGGAC CGTCGACGAA CTGGCGCTGA TCCGTCTCGA CGAAGTCGTC
GCCGACGCTC GCGACGCGGC CCAGCCGGAC GGGGTCGCTG TCGACGGTCC GCCAGCGACG
ACTATCGAGG CCGATCGCAC GCGGCTCCAC GAACTGTTCG TCAGCATCTT CCGGTTCCTC
TCGCACAACG GCGGCACGGA CGGACGCGTC GCGATCCGAC CGGACGGGTT CGTCGTCGAG
ACGGACTGGG TTCCGCCCGA GGAACTGGCC GACGACGAGC TGTTCGAGTA CTCCGGTGGG
TTGACCGACA CGAAGACCGG GCTCGCGCTA CCGAAAGTGC GAACGCTGGT GCGAGTCCAG
GGCTGGGAGG TGGCCCTGGA GCGGACGGGC GAGGGCTCGC GGATCGTCGT GTCCGGAGCG
CGCGTCCGCG AGGACGTGTC CCCGTCGTCC TGA
 
Protein sequence
MSALLGFSLK AVYGVFFLVA ALACLGSLAR ARTVDDRDTR YGLIGLLLTS GLWALTYLGI 
IYSPTTALKV AWYTAGLVVG FGTVFAWLYF CSAYTDRTYH EARSMQLVGL GLYALVVGIK
LTNPIHERYF TAQMVQEPFT HLAIQHGTVH WLATGLAYVL AAVGLFMLFE AFANAGYDTR
SLGGLTALTV LPIALDLVAF ESTALIDIIY APLGVAAFAV GVLFFARDRF LAIQLTGDIP
EPVVFLDEDD RIREYNDAAA RLFPTLSGTR GRSVTAALPV GQELSGQEIV AVEGDETRYF
LVNASPLTSV QSNICRMLVF VDVTRLERQR QELERHNEQL EDFSAGIRHE LLNSLQVVGG
QVSAAGTALE SGNVGQARET LSTVSRRARE METVVDGLST LARHGRTVDE LALIRLDEVV
ADARDAAQPD GVAVDGPPAT TIEADRTRLH ELFVSIFRFL SHNGGTDGRV AIRPDGFVVE
TDWVPPEELA DDELFEYSGG LTDTKTGLAL PKVRTLVRVQ GWEVALERTG EGSRIVVSGA
RVREDVSPSS