| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hmuk_1347 |
|---|
| Symbol | |
|---|
| ID | 8410867 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halomicrobium mukohataei DSM 12286 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013202 |
|---|
| Strand | - |
|---|
| Start bp | 1271902 |
|---|
| End bp | 1273635 |
|---|
| Gene Length | 1734 bp |
|---|
| Protein Length | 577 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 645019678 |
|---|
| Product | dihydroxy-acid dehydratase |
|---|
| Protein accession | YP_003177175 |
|---|
| Protein GI | 257387402 |
|---|
| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
|---|
| TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.0142863 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAAGC AGGAGCGGAC ACCTGATGCC GACGAGGGGA AGGACCCGGA ACTCCGGAGT
TCTGAAGTCA CGGAGGGCTA CGAGAAGGCA CCCCACCGCG CGATGTTCCG TGCGATGGGG
TACGACGACG AAGACCTCTC CTCGCCGATG ATCGGCGTCG CCAACCCCGC GGCCGACATC
ACGCCGTGTA ACGTCCACCT GGACGACGTG GCCGACGCGG CCTACGAGGG GATCGACGAG
ACCGAGGGGA TGCCCATCGA GTTCGGGACG ATCACGATCT CTGACGCCAT CTCCATGGGG
ACCGAGGGGA TGAAGGCGTC GCTGATCTCC CGGGAGGTCA TCGCCGACTC GGTCGAGCTC
GTCTCTTTCG GCGAGCGCAT GGACGGTCTG GTCACCATCG GTGGCTGTGA CAAGAACATG
CCCGGGATGA TGATGGCCGC GATCCGGACG GACCTGCCAA GCGTCTTCCT CTACGGGGGG
TCGATCATGC CCGGCGAGCA CGACGGCCGC GAGATCACGA TCCAGAACGT CTTCGAGGGC
GTCGGCGCGG TCGCCGACGG CGACATGAGC GAGGACGAAC TCGACGAGAT GGAGCGCAAC
GCCTGCCCCG GCGCGGGCTC CTGTGGCGGG ATGTTCACCG CCAACACGAT GGCCTCCATC
TCGGAGGCGC TCGGGTTTGC GCCGCTGGGC TCGGCCTCGC CGCCCGCGGA ACACGAGTCC
AGATACGAGG AGGCACGCCG GGCCGGCGAA CTCGCGGTCG AGGCAGTCCA GGAGCAGCGT
CGCCCCTCCG ACTTTCTCAG CCGCGAGTCC TTCGAGAACG CCATCGCGCT GCAGGTCGCG
GTCGGCGGCT CGACCAACGC CGTGCTCCAC ATCCTGGCGC TCGCGGCGGA GGCCGGCGTC
GACCTCGACA TCGAGGCGTT CAACGAGATC AGCAAGCGCA CGCCGAAGAT CGCCGACCTC
CAGCCCGGCG GCGAGCGCGT CATGAACGAC CTCCACGAGG TCGGCGGCGT CCCGGTCGTC
CTGAACGCCC TCTACGAGGC GGACCTGCTC CACGGCGACG CGCTGACGGT GACCGGCGAC
ACGCTCGGAG ACGCCCTCGA AGCCTACGAC CCGCCCGCGA TCGAGGACGT CGACGTCGAC
TACCTCTACA GCGTCGACGA ACCCAAGAAC GAGCAGGGTG CCATCCGCAT CCTCACGGGG
AACCTCGCGC CCGACGGCGC GGTCATCAAG ATCTCGGGCG AGGAGTACCT CCGCCACGAG
GGACCGGTCC GCATCTTCGA CGAGGAGTCG GCGGCGATGA AGTACGTCCA GGAGGGCCAC
ATCGAGTCCG GCGACGTGAT CGGCATCCGC AACGAGGGCC CCCGCGGCGG TCCCGGAATG
CGGGAGATGC TGGGGGTCAC GAGCGCCGTC GCCGGCCAGG GTCACGCCGA CGACGTGGCG
CTCTTTACCG ACGGCCGCTT CTCCGGTGCG ACCCGTGGCT TCTCGATCGG CCACGTCGCC
CCCGAGGCCT ACGTCGGTGG TCCCATCGCG GCGCTGGAGG ACGGCGATAC GATCACGATC
GACATCGAGA ATCTCGAACT CTCCGTGGAC CTCTCCGACG AGGAGATCGA ACAGCGCCTC
GAAGAGTACG ACCCCGACCC CAACTACGAC AGCGGCGTGC TGGCGAAGTA CCACCGCGAC
TTCGGCTCCG CGGCCAACGG CGCGGTGACC AACCCCGGCG CGAAGTGGGA CTGA
|
|---|
| Protein sequence | MSKQERTPDA DEGKDPELRS SEVTEGYEKA PHRAMFRAMG YDDEDLSSPM IGVANPAADI
TPCNVHLDDV ADAAYEGIDE TEGMPIEFGT ITISDAISMG TEGMKASLIS REVIADSVEL
VSFGERMDGL VTIGGCDKNM PGMMMAAIRT DLPSVFLYGG SIMPGEHDGR EITIQNVFEG
VGAVADGDMS EDELDEMERN ACPGAGSCGG MFTANTMASI SEALGFAPLG SASPPAEHES
RYEEARRAGE LAVEAVQEQR RPSDFLSRES FENAIALQVA VGGSTNAVLH ILALAAEAGV
DLDIEAFNEI SKRTPKIADL QPGGERVMND LHEVGGVPVV LNALYEADLL HGDALTVTGD
TLGDALEAYD PPAIEDVDVD YLYSVDEPKN EQGAIRILTG NLAPDGAVIK ISGEEYLRHE
GPVRIFDEES AAMKYVQEGH IESGDVIGIR NEGPRGGPGM REMLGVTSAV AGQGHADDVA
LFTDGRFSGA TRGFSIGHVA PEAYVGGPIA ALEDGDTITI DIENLELSVD LSDEEIEQRL
EEYDPDPNYD SGVLAKYHRD FGSAANGAVT NPGAKWD
|
|---|
| |