Gene Hmuk_1286 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1286 
Symbol 
ID8410806 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1216390 
End bp1217085 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content62% 
IMG OID645019617 
ProductV-type ATP synthase subunit D 
Protein accessionYP_003177114 
Protein GI257387341 
COG category[C] Energy production and conversion 
COG ID[COG1394] Archaeal/vacuolar-type H+-ATPase subunit D 
TIGRFAM ID[TIGR00309] H(+)-transporting ATP synthase, vacuolar type, subunit D 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAAGG ACGTCAAACC CACCCGGAAA GAGCTGATGC GAATCGAGGA TCGCATCGAC 
CTCTCGGAAC GGGGCCACGA CACGCTGGAG AAGAAACGCG ACGGCCTCAT CATGGAGTTC
ATGGACATCC TCGACCAGGC ACAGGACGTT CGATCCGACC TCGACGACTC CTACGGTCGC
GCCCAACACG CGATCAACAT GGCTCGGGCG ATGGACGGCG ACGTGGCCGT CCGCGGTGCC
GCGGCCGCAC TGAAGGAGCA TCCTGAGCTG ACGACCCAGT CCAAGAACAT CATGGGCGTC
GTCGTCCCCC AGATCGAGTC CAGCAAGGTC CGTAAGTCCC TCGACGAGCG TGGATACGGC
GTCATGGGTA CGTCGGCCCG GATCGACGAG GCCGCCGACG CCTACGAGGA ACTCATCGAG
AACATCATCC TCGCGGCCGA GGTCGAGACC GCGATGAAGA AGATGCTCGA GGAGATCGAG
ACCACCAAAC GCCGCGTCAA CGCGCTGGAG TTCAAGCTGC TGCCCGATCT GTACGACAAC
AAGGAGTACA TCGAGCAGAA GCTCGAAGAA CAGGAGCGCG AAGAGATCTT CCGCATGAAG
AAGATCAAGA ACAAGAAAGA GGAAGAGGAG GCTGCAGCCC GCGAGGAAGA GAACGCGGAG
GCCGAAGAGG CCGCCGCCGT CGCCGCCGAC GACTGA
 
Protein sequence
MAKDVKPTRK ELMRIEDRID LSERGHDTLE KKRDGLIMEF MDILDQAQDV RSDLDDSYGR 
AQHAINMARA MDGDVAVRGA AAALKEHPEL TTQSKNIMGV VVPQIESSKV RKSLDERGYG
VMGTSARIDE AADAYEELIE NIILAAEVET AMKKMLEEIE TTKRRVNALE FKLLPDLYDN
KEYIEQKLEE QEREEIFRMK KIKNKKEEEE AAAREEENAE AEEAAAVAAD D