Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hmuk_1093 |
Symbol | |
ID | 8410612 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halomicrobium mukohataei DSM 12286 |
Kingdom | Archaea |
Replicon accession | NC_013202 |
Strand | - |
Start bp | 1042833 |
End bp | 1044170 |
Gene Length | 1338 bp |
Protein Length | 445 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 645019429 |
Product | conserved repeat domain protein |
Protein accession | YP_003176927 |
Protein GI | 257387154 |
COG category | [R] General function prediction only |
COG ID | [COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) |
TIGRFAM ID | [TIGR01451] conserved repeat domain |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.396809 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCGACC GCGTCCGGCG CTGGGGCGTC CCGCTCGCGG GGACGGTGAC GCTACTGAGC GTCGGTCTCC TGGCCGCCGA ACCGGCCCTC TTCGCGGGGG CGGCGATCCC CCTCGCCTCC GTGCTGGTCG GGTCGCTGTC GCGAGTCCCG TCGGGAGCCA ACCTCGACGC CGACCGGACC GTGGCCGCCG CCGCACCGAC GCCGGGCGAT CCGGTCGACG TGACGCTGAC CGTCGAGAAC ACCGGCCGGC GGACCCTGAC CGACGTTCGG ATCGTCGACG GCGTCCCCGC CGAGCTGACC GTCGTCTCGG GCTCGCCGCG GGCCTGTCGC TCGCTGCGGC CGGGCGAGTC GACGACCGTC GAGTACGCCG TCCGCTCGAA GCGGGGGACC TACGCCTTCG AGGACCCCGT CGTTCGAATC CGGCCGCTGG CGGCCACCGA GATCGCCACG GCGACGGTCG CCGCGACGGG CGACACCGCC CTGACCTGTG CCAACGTGGT CGCCGAGGCA CCGCTGGCCG ACGCGACGCT GCCCCGCGCC GGCACGCTCC CGACCGACAG CGGCGGCAGC GGGCTGGAGT TTCACGCGAC CCGCGACTAC CAGTCGGGCG ATCCGGTCTC GCGAATCGAC TGGCGGCGCT TGGCCAAGAC CGGCGAACTG ACGACCGTCG AGTACCGCGA GGAACAGGCC GTCCGCACGG TGCTGGTCGT CGACGCACGC CCCCCGACGC GGGTGACGCC GGAAGCGGGG TATCCGACGG GTGCCGAGCT GTCCGCCTAC GCCGCCGAGC GTCTGCTCGA TGCCCTGTCC AGATCGAGTG TCGTCGCCAG CGTCACCGCC GTCGGGCTCG CAGACGAGGA TCTCGTGGGC GGGCTCGGCC CCGACGGACT GGCCTGGGCT GACCCCGACG GCGGCGTCGA GAGCCCGCAG GCGAGTCGTC TGTTCGACGG CGTCCAGTCG GCGGCCGCAC GCGACAGCGT CGCCCCCGAC GGCGGCGAGC GGGAGGGGGC AGAGACCCCG ACGGATCGGA CCGTCCCCGA CATCCAGTCG CTGCTCGCTC GCCTCCCGCC GACGGCTCAG GTCGTCGTCT TCTCGCCGCT GCTCGACGAC TGGCCGACCG AACTGATCAC GAGCCTCCGG GCGCGGAGCT ACCCGACGAC CGTCGTCAGT CCCGACGTGA CTCGCGGCGA GGGACCGGCC CAGACCGTCG TCGCGCTCGA ACGCCGGCTG CGCCTCCAGT CGGTGGAGCT GACCGGGGCG ACGCTGATCG ACTGGGACCT CGACGAACCG ATCGACATCG CCATGCGGGC CTCGCTCGCG GAGCTGTTCA ACCGATGA
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Protein sequence | MTDRVRRWGV PLAGTVTLLS VGLLAAEPAL FAGAAIPLAS VLVGSLSRVP SGANLDADRT VAAAAPTPGD PVDVTLTVEN TGRRTLTDVR IVDGVPAELT VVSGSPRACR SLRPGESTTV EYAVRSKRGT YAFEDPVVRI RPLAATEIAT ATVAATGDTA LTCANVVAEA PLADATLPRA GTLPTDSGGS GLEFHATRDY QSGDPVSRID WRRLAKTGEL TTVEYREEQA VRTVLVVDAR PPTRVTPEAG YPTGAELSAY AAERLLDALS RSSVVASVTA VGLADEDLVG GLGPDGLAWA DPDGGVESPQ ASRLFDGVQS AAARDSVAPD GGEREGAETP TDRTVPDIQS LLARLPPTAQ VVVFSPLLDD WPTELITSLR ARSYPTTVVS PDVTRGEGPA QTVVALERRL RLQSVELTGA TLIDWDLDEP IDIAMRASLA ELFNR
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