Gene Hmuk_1082 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1082 
Symbol 
ID8410601 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1029130 
End bp1030059 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content66% 
IMG OID645019418 
ProductABC transporter related 
Protein accessionYP_003176916 
Protein GI257387143 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.124615 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGCAA TAGAACTGGA CGGAGTAACG AAGCGGTTCG ACGGCGTGAC CGCGCTACAG 
GAGGTGGATC TCACCGTCGA AGAGGGTGAG ATCTTCGGCT TCCTCGGCCC CAACGGCGCT
GGGAAGTCGA CGAGCATCAA CATCCTGCTG GACTTCGTCC GGCCCACGGA GGGTCGCGCG
GAGGTACTGG GCTACGACTC CTACGAGGAC TCCACGCGGA TCCGCGAGCG GATTGGTGTC
CTCCCGGAGG GCTACGACGT GTACGATCGG CTTACCGGAC TCCAGCACCT GGAGTTCGCG
ATCGAGTCGA AAGACGCCGA CGACGACCCG CACGCCCTGC TGGATCGGGT CGGCCTCAGC
GAGGAAGATG CAAAGCGCAA GGCGGGAGGC TACTCCAAGG GGATGTCCCA GCGTCTCGTG
CTGGCGATGG CGCTGGTCGG CGAGCCCGAC CTGCTGATCC TCGACGAGCC CTCCTCCGGG
CTCGACCCCA ACGGCGCGCG GATGATGCAG GAGATCGTTC GCGAAGAGAA CGAACGCGGC
GCGACCGTCT TCTTCTCCTC GCACATCCTC GGGCAGGTCG AGGCCGTCTG TGACACCGTC
GGGATCCTCA GAGAGGGCGA ACTGGTCGCC AAAGACACCA TCGAGGGGCT GCGAGCGGCC
TACGACACCG GCCTCACGCT GACGGTCACC GTCGGCGGGA CCGCCAGCCA GATCGACGAC
GGTGTGGCTG CCGTCCGGGC ACTGGACGCC GTCTCCGACG TGCGTGCCGA CAGCGACGCG
ATCACGGTCA CCTGCGAGGG CGACCAGAAG ATGGCGGTCC TGAACGCGCT GGAAGACGCC
GAGGTCAGCG TCGAGGACTT CGAGACCGAG GAGGCGTCGC TCGACGACGT GTTCAGCTCC
TACACCGAGC GCCAGGAGGC CGAAGCATGA
 
Protein sequence
MAAIELDGVT KRFDGVTALQ EVDLTVEEGE IFGFLGPNGA GKSTSINILL DFVRPTEGRA 
EVLGYDSYED STRIRERIGV LPEGYDVYDR LTGLQHLEFA IESKDADDDP HALLDRVGLS
EEDAKRKAGG YSKGMSQRLV LAMALVGEPD LLILDEPSSG LDPNGARMMQ EIVREENERG
ATVFFSSHIL GQVEAVCDTV GILREGELVA KDTIEGLRAA YDTGLTLTVT VGGTASQIDD
GVAAVRALDA VSDVRADSDA ITVTCEGDQK MAVLNALEDA EVSVEDFETE EASLDDVFSS
YTERQEAEA