| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hmuk_0943 |
|---|
| Symbol | |
|---|
| ID | 8410459 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halomicrobium mukohataei DSM 12286 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013202 |
|---|
| Strand | - |
|---|
| Start bp | 905102 |
|---|
| End bp | 906040 |
|---|
| Gene Length | 939 bp |
|---|
| Protein Length | 312 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 645019278 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_003176779 |
|---|
| Protein GI | 257387006 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.301949 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGAATCG CAGAAGAGTA CACGGAGCCG TCGGCCGGCT CCCGTTTCGA ACGGGGACTG
CAGTACCTAC GGAAGCACAG TCAGGCGTAT CTCCTGATCG CGCCGGCCGC GATCTTCCTG
CTGAGCGTCG TCGGGTGGCC GATCCTGGAG ACGTTCCGGC TGTCCTTCTA CGAGTCGCCG
GCGGACTCGA CGATCGAGAC GTACGTCGGC TTCCAGCACT ACGTGGAGAT CCTCCAGAGC
GACATCTTCT ATCAGTTGCT CTGGCAGACC GGCCGCTGGG TGCTGGTCGG CGTCGCCGGC
AAGGCGCTGC TGGGCCTGCT GATCGCGATT CACCTCAAGG GCGACATCCG CGGTCGGAAG
TTCTTCCGGA CCGCGTTCCT CATCCCGTGG GGGATCCCGT ACGCGATCTC GGCGGTCGTC
TTCCGCTGGA TCGAGCACCC CCAGTACGGC TACCTCAACG CGATCCTGAT CAAGCTGGGC
GTGATCGACC AGGGGATCGG TATCCTCGGC AACCCGGAAG TCGCCTGGCT CGGCGTCGTC
GTGGCCGACA TCTGGATCGG GACGCCGTTC ATGGCGATCA TCTTCCTCGC GGGACTCCAG
TCGATCCCCG AGGAGCTGTA CGAGGCCGCG GCCATCGACG GCGCGGAGAA GTGGGAGCAG
TTCCGCTACA TCACGCTCCC ACAGCTCAAG AGCGTCATCC TGATCGCGAC GCTGCTGTCG
ACGATCTGGA CGTTCGTCAG CTTCGACACC ATCTGGACGA TGACCGGCGG CGGGCCGATC
AACACCACGT CCACGCTCGT GATCTGGATC TACCAGGTCG GGCTGCAAAA CGGGAACCTC
GGCCGGGGCG CGGCCTACAG CGTCGTCGGG TTCCTGTTCC TGCTGGTGTT TGCCGTGATC
TACCTGCGGA TCTACACCCG CGGAGGTGAC GAACTATGA
|
|---|
| Protein sequence | MGIAEEYTEP SAGSRFERGL QYLRKHSQAY LLIAPAAIFL LSVVGWPILE TFRLSFYESP
ADSTIETYVG FQHYVEILQS DIFYQLLWQT GRWVLVGVAG KALLGLLIAI HLKGDIRGRK
FFRTAFLIPW GIPYAISAVV FRWIEHPQYG YLNAILIKLG VIDQGIGILG NPEVAWLGVV
VADIWIGTPF MAIIFLAGLQ SIPEELYEAA AIDGAEKWEQ FRYITLPQLK SVILIATLLS
TIWTFVSFDT IWTMTGGGPI NTTSTLVIWI YQVGLQNGNL GRGAAYSVVG FLFLLVFAVI
YLRIYTRGGD EL
|
|---|
| |