Gene Hmuk_0937 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_0937 
Symbol 
ID8410453 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp900069 
End bp901388 
Gene Length1320 bp 
Protein Length439 aa 
Translation table11 
GC content68% 
IMG OID645019272 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_003176773 
Protein GI257387000 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.725221 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACCC GCTCGCGGCG TGGGCTCGCG ATCGTCTTCG CCGTCGTCTT TCTGGACCTG 
CTGGGGTTCG GGATCATCAT CCCGATCCTG CCCTACTACA CGCGCACGTT CCCCGGCGGT
ACGGAGTTCG TCATCGGACT GCTGGCGGCC TCGTACTCGC TCATGCAGTT CGTCTTCGCT
CCACTGCTGG GCTCGCTCTC GGACCGGATC GGCCGTCGCC CCGTCATCGT GGTGTCGCTC
GGCGGCTCGG TGATCGCCTG GACCGTCTTC GGGCTGGCCG ACGCGCTGTG GCTGTTGTTC
CTCTCACGCA TGCTCGCAGG TGCGATGGGT GGGAACCTCT CGACGGCACA GGCCTACGTC
GCCGACGTGA CCCCGCGAGA GGAGCGAGCG AAGTCACTGG GCCTGCTCGG GGCCGCGTTC
GGACTGGGAT TTATCTTCGG TCCCGGAATC GGTGCAGTGT TGAGTTTCGA CGGCGTCGTC
GCCGCCGTCG ACGGCCTCGT CCCGGTCGTG GCCATCACCC GCTTCTCGCT GCCGAGTTTC
GCCGCCGCCG CGGCGAGTCT CTGCGGCGTC GTCGTCACGC TACTGTTCCT GCCGGAGTCG
CTGCCGGCCC CCGCCCGCGG CGACGAGACC ACGCGGCGGC CGTCCCAGAT CGCGCAGTTG
GTGACGGCCG TCCGGACGAC CGGGTTGCGA GAGCTGCTCG CCGCGTTCTT CCTCGTCTCC
TTCGCGTTCT CGGGCGTCCA GATCATGTTC ATTCCGTTCG TCGCCGACGT GTACGGCTAC
ACGGCGAGTC AGAGCGCGCT CTTGCTCACC TATATCGGCG TGCTGTCGGT CGTCGTCCAG
GGCGTGTTGA TCGGGCGACT GACGGCGCGA TACGCCACAG TGTCGCTGAC GGTCGGTGGG
ACCGCGGTGC TCGCAGTGGG CGTCGGGCTC TTGCCGTTCA CGAACTGGCT GGGAGCGAGC
GTCTTCGATC TGACCGGCGT CGCACCGTTT CTCACCGGCG AGTTGCTGGC ACTGCTGGCG
GTGCTGACGC TGCTGCCGCT CGGCAACGGC GTGTTGTCGG TGACGCTGAC GACGATCGTC
TCCCAGCGAG CCTCCGCCGC GACCCAGGGG AGCGCGTTCG GCCTGACACA GGGTGCCGGC
AGCCTCGCGC GGACGGTCGG GCCGATCGTG ATGGGCGGGC TCTACACCGT GGTGGGTTAC
TGGTCGCCGT TCGTCGTCGG CGCGGTGTTG CTCGTCCCCG TCGGAGTGTT GGTCCTCCGT
CTCGGGAACG CTCCGGAGCC GCCCGAGCCG CGGCCTGTCG ATCCGGGCCA CGTTCGATGA
 
Protein sequence
MATRSRRGLA IVFAVVFLDL LGFGIIIPIL PYYTRTFPGG TEFVIGLLAA SYSLMQFVFA 
PLLGSLSDRI GRRPVIVVSL GGSVIAWTVF GLADALWLLF LSRMLAGAMG GNLSTAQAYV
ADVTPREERA KSLGLLGAAF GLGFIFGPGI GAVLSFDGVV AAVDGLVPVV AITRFSLPSF
AAAAASLCGV VVTLLFLPES LPAPARGDET TRRPSQIAQL VTAVRTTGLR ELLAAFFLVS
FAFSGVQIMF IPFVADVYGY TASQSALLLT YIGVLSVVVQ GVLIGRLTAR YATVSLTVGG
TAVLAVGVGL LPFTNWLGAS VFDLTGVAPF LTGELLALLA VLTLLPLGNG VLSVTLTTIV
SQRASAATQG SAFGLTQGAG SLARTVGPIV MGGLYTVVGY WSPFVVGAVL LVPVGVLVLR
LGNAPEPPEP RPVDPGHVR