| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hmuk_0883 |
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| Symbol | |
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| ID | 8410398 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halomicrobium mukohataei DSM 12286 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013202 |
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| Strand | + |
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| Start bp | 851331 |
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| End bp | 852716 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 645019218 |
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| Product | PKD domain containing protein |
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| Protein accession | YP_003176720 |
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| Protein GI | 257386947 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3979] Uncharacterized protein contain chitin-binding domain type 3 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.00168906 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.17524 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACAATT CACGCAGAGA GTTCATTCGT GCGGTATCGA GTACGTTCGT CCTCGCGGCT
GGCGCTGGCA CGACCGTGGC CGCGACGGAC TGTGGCAACG TTGCCGAGTG GGACCCGGAC
GCGACCTACA ACGGCGGCGA TCAGGTGACC TACGAGGGGT CCCTGTGGAC CGCCGAGTGG
TGGACTCGGG GCTCCGCCCC CGAAGAGAGT AAAGCCGTCT GGACGCTCGA AGGGTCCTGT
GGCGGCGACG GCGGGACGGG CAACGAGGGA CCGACGGCGT CGGTCAGCGC GTCCGCGACC
ACGGTCGAGC CCGGAACGAC CGTCGACCTC GACGGATCGG GATCGTCCGA CGCCGACGGG
TCGATCGCCA GCTACGAGTG GGAGTTGGGC GACGGGACGA CGGCGACCGG GGCGACGACG
AGTCACAGCT ACGACTCGAC CGGGGACTAC ACCGTCACGC TCACCGTCAC CGACGACGGC
GGAGCCACCG ACAGCGCGAC GACGGGGATC TCTGTCAGCT CCTCGTCGGG CGGCAACAGT
GACGCCATCT TCTCCCCGTA TCTCGGCACG TGGGGCGACA TCCTCGGCGA CACGCGGAAC
GCGAGCACCG ACCGCGTCGT CCTCTCGTTC GTCGGCGACG GCACCGACGA CGGGACGGTC
ACTCCCGCGT GGCTCACCGC GGACGGCGAC CGGCCGCTCT CGGACCACGC CGACAAGATC
AGCACGCTGC AAGACGAGGG CTACGACGTG TGGGTCGCCA TGGGCGGCTG GGACGGCCGG
ATCGTCGCCA GGGACGCGAG CAGCGTCTCG GAGGTCAAAA GCGCCTACGA GACCGTCATC
GACACGCTCG GCGTGACTCA CATCGACATC GACGACGAGA ACTACGACGA GCCCGGTCGT
GACGGCACCT ACTACGAGAT GCGCAACGAG GCGCTCGCAC AGATCCAGTC CGAGCGGCCG
GACGTGAAAG TCACGTACAC GGTGGCCGCC AGGCCCTCCG GGATCGTCAA CGCCGACCAC
TGTCCCGGGA AAGACATGAT CACCGACGCG CTGGAGAAGG GCGTCGAGCT GGAGTACATC
AACATCATGA CGATGGACTG GACCGACGTG GACACGACCC CCGAACGGGT CAAATCGGCC
GTCGAGGGCA CCGTCGACTG GATGAGCAAC GTCTATCCCG ACAAGAGCGA GGCACAGCGG
CGCGCGAAGC TCGGGTTCCT CCCCAACGTC AACGAGTCCG AGTGGTCGGT CAGCGACACC
CAGAACGTCG CCGACTACGC GAAACAGCAG GGGATCGGAA ACGTCAGCAT GTGGGCGCTG
CACCGAGACA CCAGCGACTA CGGCCACTCC GACGCCCTCT ACCCCGTCGA GAGCGGGAGC
AACTGA
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| Protein sequence | MDNSRREFIR AVSSTFVLAA GAGTTVAATD CGNVAEWDPD ATYNGGDQVT YEGSLWTAEW
WTRGSAPEES KAVWTLEGSC GGDGGTGNEG PTASVSASAT TVEPGTTVDL DGSGSSDADG
SIASYEWELG DGTTATGATT SHSYDSTGDY TVTLTVTDDG GATDSATTGI SVSSSSGGNS
DAIFSPYLGT WGDILGDTRN ASTDRVVLSF VGDGTDDGTV TPAWLTADGD RPLSDHADKI
STLQDEGYDV WVAMGGWDGR IVARDASSVS EVKSAYETVI DTLGVTHIDI DDENYDEPGR
DGTYYEMRNE ALAQIQSERP DVKVTYTVAA RPSGIVNADH CPGKDMITDA LEKGVELEYI
NIMTMDWTDV DTTPERVKSA VEGTVDWMSN VYPDKSEAQR RAKLGFLPNV NESEWSVSDT
QNVADYAKQQ GIGNVSMWAL HRDTSDYGHS DALYPVESGS N
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