Gene Hmuk_0859 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_0859 
Symbol 
ID8410374 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp831375 
End bp832097 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content72% 
IMG OID645019195 
Product1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 
Protein accessionYP_003176697 
Protein GI257386924 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0106] Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase 
TIGRFAM ID[TIGR00007] phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.710358 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTCCGG AGTTTGCGGT GATCCCGGCG GTGGACATGC AGGACGGGCA GGTGGTCCAG 
CTGGTCGGTG GGGAACGCGG GACCGGCAAG CGCTACGGCG AGCCTGTCGC GGCCGCCCGA
CGGTGGATAG AGGCCGGTGC GACGACGCTG CACCTGGTCG ACCTCGACGG TGCCTTCGAG
GGTGAGCGAG CGAACGCCGA CGCGATCGAC GCCGTCCTCG ACGCCGTCGA CGCGGACGTG
CAGTTGGGCG GGGGCATTCG GACGGCCGAG GACGCGATCG ACCTGCTCGA CCGGGGCGTC
GACCGGGTCA TTCTCGGCAC CGCGGCCGTC GAGAACCCCG ACATCGTCGC CGAGATCAGC
GAGGAACATC CCGAGAGCGT CCTCGTGAGC CTCGACGCCA AGGACGGCGA AGTGGTCGTC
TCGGGGTGGA CCGAGGGGAC CGGGCTGGAC CCGGCCGAGG CCGCGAGCCG CTACGCGGAG
CTCGGTGCCG GCGGGATTCT CTTCACCGAC GTGGACGTCG AGGGGCAACT GGAGGGGGTC
CGCACGGAGC CGGTCCGGCG CGTCGTCGAC GCCGTCGAGA TCCCCGTGAT CGCCAGCGGC
GGCGTCGCGA CCGTCGAGGA CGTGCGAGCG CTCCGGGACG CGGGTGCGGC CGCCGTCGTC
GTCGGCAGCG CGCTCTACGA GGGCGCGTTC ACGCTCGAAG AAGCGATGGC GGCGGTCGAG
TGA
 
Protein sequence
MFPEFAVIPA VDMQDGQVVQ LVGGERGTGK RYGEPVAAAR RWIEAGATTL HLVDLDGAFE 
GERANADAID AVLDAVDADV QLGGGIRTAE DAIDLLDRGV DRVILGTAAV ENPDIVAEIS
EEHPESVLVS LDAKDGEVVV SGWTEGTGLD PAEAASRYAE LGAGGILFTD VDVEGQLEGV
RTEPVRRVVD AVEIPVIASG GVATVEDVRA LRDAGAAAVV VGSALYEGAF TLEEAMAAVE