Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hmuk_0816 |
Symbol | |
ID | 8410330 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halomicrobium mukohataei DSM 12286 |
Kingdom | Archaea |
Replicon accession | NC_013202 |
Strand | - |
Start bp | 786617 |
End bp | 787264 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 645019151 |
Product | signal sequence peptidase |
Protein accession | YP_003176654 |
Protein GI | 257386881 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0681] Signal peptidase I |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.019446 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCGAGC CACGCGGTCC GAACCCGCCC GACGACGACC AACCGGGCGG GCTCGTCTAC CTGTTCGATC TCGTCAGCAG TGCCGGCGCA GTCGTCGCAG TCGGACTGTT GCTGTTCGCG ATCAGCGGCG TGTGGCCGCC GCTGGTCGCG ATCGAGTCCG GTAGCATGGA ACCACACATC GACACCGGCG ACCTCGTCTT CGTCATGGAC GAAGACCGCT TCGCCGGTGA GGGAGCCTAC GCCGACACCG GCGTCGTGCC CGCAAATCGC GGCGCTGACA CCGGCTACAG GTCGTTCCAG AACGACGGCG ACGTGATCGT CTTCCAGCCC GACGGCGACG GAGCGTCCAC ACCAGTGATC CACCGAGCGA TGTTCTGGGT CAACGAGAGC GAAAACTGGT ACGACAAGGC GGATCCCGCC TACATCAACG CCGACAGCTG CGAGGAACTG CGCAACTGCC CGGCCGACTC GGCCGGCTTC GTGACGAAAG GTGACAACAA CGCCGGCTAC GACCAGGTCA ACGGGCTGCC GAGCTGTGGC CCCGGTGCCT GCGATCCGGT CCGAAAGTCC TGGGTCGTCG GGACCGCCGA GACGAGAGTG CCACTACTGG GCAACATCCG GCTCCAACTC CAGCGAGCGC TGGCCTGA
|
Protein sequence | MSEPRGPNPP DDDQPGGLVY LFDLVSSAGA VVAVGLLLFA ISGVWPPLVA IESGSMEPHI DTGDLVFVMD EDRFAGEGAY ADTGVVPANR GADTGYRSFQ NDGDVIVFQP DGDGASTPVI HRAMFWVNES ENWYDKADPA YINADSCEEL RNCPADSAGF VTKGDNNAGY DQVNGLPSCG PGACDPVRKS WVVGTAETRV PLLGNIRLQL QRALA
|
| |