Gene Hmuk_0427 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_0427 
Symbol 
ID8409926 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp415246 
End bp415725 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content66% 
IMG OID645018750 
ProductPUA domain containing protein 
Protein accessionYP_003176268 
Protein GI257386495 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2016] Predicted RNA-binding protein (contains PUA domain) 
TIGRFAM ID[TIGR00451] uncharacterized domain 2 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGTCA AGTCGCGCCA CCACCTCAGG GCCGACGAGA TCGACGCCAT CGAGGAGTCC 
GTGGCCGCGA ACCTCGGCGT GGAGCTGGAC GCCGACACCT TCGAGAAAGT GGAGTTCGAG
GACAGCGACT GGGACGTGGT GCTGGTCGAC GGCGACCCGC TCGTGCTGTA CGTCGAAGGC
GAGCCGTTCC TCACCGTCGA GGGACTCAAC GCGTACCCGC CGACAGACCA CGTAGTCACC
GTCGACAGCG GCGCGATCTC GTTCGTCTCT GACGGCGCAG ACGTGATGCG GCCCGGCATC
ACCGAGGCCG ACGACGGCAT CGCTGCGGGC GATCTCGTCG CGATCAACGA GGAATCACAC
GGGAAGTTCC TCGCCGTCGG GCGCGCGAAG GCGAGCGGCG ACGGGATGGT CGGCGACAGC
GGGAAGGTCG TCGAGTCGAT CCACCACGTG GGTGACGACC TCTTCGAGTT CTCCGTCTGA
 
Protein sequence
MNVKSRHHLR ADEIDAIEES VAANLGVELD ADTFEKVEFE DSDWDVVLVD GDPLVLYVEG 
EPFLTVEGLN AYPPTDHVVT VDSGAISFVS DGADVMRPGI TEADDGIAAG DLVAINEESH
GKFLAVGRAK ASGDGMVGDS GKVVESIHHV GDDLFEFSV