Gene Hmuk_0417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_0417 
Symbol 
ID8409915 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp404868 
End bp406850 
Gene Length1983 bp 
Protein Length660 aa 
Translation table11 
GC content65% 
IMG OID645018739 
ProductABC transporter related 
Protein accessionYP_003176258 
Protein GI257386485 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.899046 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGTCG ACGCCGGGGA CGACGACGCC TTCGAGGACG TTCGCGAAAA CGTCGATCAC 
CCGATGCGCC GGCTGTTCGC CGAATACGGC CGGGACAACA CCGGCGCGTT CACGGTCGGC
CTACTGAGTA GTATCGCCGC GCGACTGCTC GATTTGTTGC CGCCGGTGTT GCTCGGCGTC
GCCGTCGACG CGATCTTTCG GAACGACCGC CCGTTCGCAC TCGGTCCAGT CGATCTATCG
GCGTACGCCT CTGATCCCGA GTCCCAGGTG ATACTCGCGT CGAGCATCAT CGCTGGCGCG
TTCATCCTCG GCGCTGGCTT TCACTGGACC CGAAACTGGG GGTGGAACGC CTTCGCCCAG
CGCATCCAAC ACGCCGTCCG GACCGACACC TACGACCGGA TGCAGCGGCT CAACATGGAC
TTCTTCGCCG ACAAGCAGAC CGGCGAGATG ATGTCGGTCC TCTCGAACGA CGTGAACCGC
CTCGAACGGT TCCTCAACGA CGGGATGAAC TCGGCGTTCC GGCTGTCGGT GATGGTCCTG
GGGATCTCGG CGATCCTCTT TTACTACAAC TGGCAGCTCG CACTCCTGAC GCTGGTGATC
GTCCCGGCCA TCGCGTTCTT CACTTACCGA TTCATCAAGG CGATCCAGCC CAAGTACGCC
GACGTGCGCT CCTCTGTCGG CCAGCTCAAC TCCCGGCTGG AGAACAACCT CGGCGGCGTG
CAGGTCATCA AGACCTACAG CACCGAAGGC TACGAGTCCG ATCGCGTCGA GGACACCTCC
CGCGACTACT TCGACGCGAA CTGGGGCGCG ATCACGACCC GGATCAAGTT CTTCCCGGGA
CTGCGCGTCC TCGCTGGCGT GGGCTTCGTC GTCACCTTCC TCGTCGGCGG GCTCTGGGTG
TACAGCGGCG AGGGGCCGTG GATCTTCACC GGGACGCTCT CCGAGGGAGA GTTCGTCGTC
TTCATCCTCC TCTCACAGCG GTTCATCTGG CCGATGGCAC AGTTCGGACA GATCATCAAC
ATGTATCAGC GGGCCTACGC ATCGGCCGAG CGCATCTTCG GTCTGATGGA CACGCCCAGC
CTCATCGAGG AGACCGACGA CGCCGAGGAG CTGGCGGTCA CCGACGGGGA AGTCGAGTAC
GACGGGGTCA CCTTCGGCTA CGGGGAGACG CAGAGCGTCT CCGAACAGTC GAGCGGGGAG
GGAACCGATC CCGCCGACGA CGAGGTCATC CTCGACGACG TGTCTTTCAC CGTCGACGGC
GGCGACACGC TCGCACTCGT CGGGCCGACG GGCGCGGGCA AGTCGACCGT GATGAAGCTC
CTGATGCGGA TGTACGACGT GAACGACGGC GCGGTCAGGA TCGACGGCCA GGACGTGCGC
GACGTGACCA TCCCGAGCCT GCGGGACGCG ATCGGCTACG TCAGCCAGGA GACGTTCCTC
TTTCACGGCA CTGTCCGTGA CAACATCGCC TACGGGAGCT TCGACGCCAC CGACGAGGAG
ATCCGAGAGG CGGCCAAGGC CGCCGAGGCC CACGGCTACA TCCAGAACCT CCCCGACGGC
TACGACACGA TGGTCGGCGA ACGCGGCGTC AAGCTCTCGG GCGGCCAGCG CCAGCGCGTC
GCCATCGCCC GTGCGATCCT CAAAGACCCC GAGATTCTCG TCCTCGACGA GGCCACCAGC
GACGTGGACA CGGAGACGGA GATGCTGATC CAGCGCTCGC TGGACCGGCT CACCGCCGAC
CGAACCACCT TCACCATCGC CCACCGCCTC TCGACGGTCA AGGACGCCGA CCAGATCGTC
GTCCTCGAAG ACGGCTCGGT CGTCGAACGC GGCTCCCACG ACGACCTGCT CGCCGAGGAC
GGCCTGTACG CCAACCTCTG GGCCGTCCAG GCCGGCGAGA TCGACGAACT CCCCGAAGAG
TTCGTCCGGC GCGCCACCGA ACGCCGCTCG CAGGTGGATG CGGAGGTCGG GGACGACGAC
TGA
 
Protein sequence
MDVDAGDDDA FEDVRENVDH PMRRLFAEYG RDNTGAFTVG LLSSIAARLL DLLPPVLLGV 
AVDAIFRNDR PFALGPVDLS AYASDPESQV ILASSIIAGA FILGAGFHWT RNWGWNAFAQ
RIQHAVRTDT YDRMQRLNMD FFADKQTGEM MSVLSNDVNR LERFLNDGMN SAFRLSVMVL
GISAILFYYN WQLALLTLVI VPAIAFFTYR FIKAIQPKYA DVRSSVGQLN SRLENNLGGV
QVIKTYSTEG YESDRVEDTS RDYFDANWGA ITTRIKFFPG LRVLAGVGFV VTFLVGGLWV
YSGEGPWIFT GTLSEGEFVV FILLSQRFIW PMAQFGQIIN MYQRAYASAE RIFGLMDTPS
LIEETDDAEE LAVTDGEVEY DGVTFGYGET QSVSEQSSGE GTDPADDEVI LDDVSFTVDG
GDTLALVGPT GAGKSTVMKL LMRMYDVNDG AVRIDGQDVR DVTIPSLRDA IGYVSQETFL
FHGTVRDNIA YGSFDATDEE IREAAKAAEA HGYIQNLPDG YDTMVGERGV KLSGGQRQRV
AIARAILKDP EILVLDEATS DVDTETEMLI QRSLDRLTAD RTTFTIAHRL STVKDADQIV
VLEDGSVVER GSHDDLLAED GLYANLWAVQ AGEIDELPEE FVRRATERRS QVDAEVGDDD