Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hmuk_0417 |
Symbol | |
ID | 8409915 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halomicrobium mukohataei DSM 12286 |
Kingdom | Archaea |
Replicon accession | NC_013202 |
Strand | - |
Start bp | 404868 |
End bp | 406850 |
Gene Length | 1983 bp |
Protein Length | 660 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 645018739 |
Product | ABC transporter related |
Protein accession | YP_003176258 |
Protein GI | 257386485 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.899046 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATGTCG ACGCCGGGGA CGACGACGCC TTCGAGGACG TTCGCGAAAA CGTCGATCAC CCGATGCGCC GGCTGTTCGC CGAATACGGC CGGGACAACA CCGGCGCGTT CACGGTCGGC CTACTGAGTA GTATCGCCGC GCGACTGCTC GATTTGTTGC CGCCGGTGTT GCTCGGCGTC GCCGTCGACG CGATCTTTCG GAACGACCGC CCGTTCGCAC TCGGTCCAGT CGATCTATCG GCGTACGCCT CTGATCCCGA GTCCCAGGTG ATACTCGCGT CGAGCATCAT CGCTGGCGCG TTCATCCTCG GCGCTGGCTT TCACTGGACC CGAAACTGGG GGTGGAACGC CTTCGCCCAG CGCATCCAAC ACGCCGTCCG GACCGACACC TACGACCGGA TGCAGCGGCT CAACATGGAC TTCTTCGCCG ACAAGCAGAC CGGCGAGATG ATGTCGGTCC TCTCGAACGA CGTGAACCGC CTCGAACGGT TCCTCAACGA CGGGATGAAC TCGGCGTTCC GGCTGTCGGT GATGGTCCTG GGGATCTCGG CGATCCTCTT TTACTACAAC TGGCAGCTCG CACTCCTGAC GCTGGTGATC GTCCCGGCCA TCGCGTTCTT CACTTACCGA TTCATCAAGG CGATCCAGCC CAAGTACGCC GACGTGCGCT CCTCTGTCGG CCAGCTCAAC TCCCGGCTGG AGAACAACCT CGGCGGCGTG CAGGTCATCA AGACCTACAG CACCGAAGGC TACGAGTCCG ATCGCGTCGA GGACACCTCC CGCGACTACT TCGACGCGAA CTGGGGCGCG ATCACGACCC GGATCAAGTT CTTCCCGGGA CTGCGCGTCC TCGCTGGCGT GGGCTTCGTC GTCACCTTCC TCGTCGGCGG GCTCTGGGTG TACAGCGGCG AGGGGCCGTG GATCTTCACC GGGACGCTCT CCGAGGGAGA GTTCGTCGTC TTCATCCTCC TCTCACAGCG GTTCATCTGG CCGATGGCAC AGTTCGGACA GATCATCAAC ATGTATCAGC GGGCCTACGC ATCGGCCGAG CGCATCTTCG GTCTGATGGA CACGCCCAGC CTCATCGAGG AGACCGACGA CGCCGAGGAG CTGGCGGTCA CCGACGGGGA AGTCGAGTAC GACGGGGTCA CCTTCGGCTA CGGGGAGACG CAGAGCGTCT CCGAACAGTC GAGCGGGGAG GGAACCGATC CCGCCGACGA CGAGGTCATC CTCGACGACG TGTCTTTCAC CGTCGACGGC GGCGACACGC TCGCACTCGT CGGGCCGACG GGCGCGGGCA AGTCGACCGT GATGAAGCTC CTGATGCGGA TGTACGACGT GAACGACGGC GCGGTCAGGA TCGACGGCCA GGACGTGCGC GACGTGACCA TCCCGAGCCT GCGGGACGCG ATCGGCTACG TCAGCCAGGA GACGTTCCTC TTTCACGGCA CTGTCCGTGA CAACATCGCC TACGGGAGCT TCGACGCCAC CGACGAGGAG ATCCGAGAGG CGGCCAAGGC CGCCGAGGCC CACGGCTACA TCCAGAACCT CCCCGACGGC TACGACACGA TGGTCGGCGA ACGCGGCGTC AAGCTCTCGG GCGGCCAGCG CCAGCGCGTC GCCATCGCCC GTGCGATCCT CAAAGACCCC GAGATTCTCG TCCTCGACGA GGCCACCAGC GACGTGGACA CGGAGACGGA GATGCTGATC CAGCGCTCGC TGGACCGGCT CACCGCCGAC CGAACCACCT TCACCATCGC CCACCGCCTC TCGACGGTCA AGGACGCCGA CCAGATCGTC GTCCTCGAAG ACGGCTCGGT CGTCGAACGC GGCTCCCACG ACGACCTGCT CGCCGAGGAC GGCCTGTACG CCAACCTCTG GGCCGTCCAG GCCGGCGAGA TCGACGAACT CCCCGAAGAG TTCGTCCGGC GCGCCACCGA ACGCCGCTCG CAGGTGGATG CGGAGGTCGG GGACGACGAC TGA
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Protein sequence | MDVDAGDDDA FEDVRENVDH PMRRLFAEYG RDNTGAFTVG LLSSIAARLL DLLPPVLLGV AVDAIFRNDR PFALGPVDLS AYASDPESQV ILASSIIAGA FILGAGFHWT RNWGWNAFAQ RIQHAVRTDT YDRMQRLNMD FFADKQTGEM MSVLSNDVNR LERFLNDGMN SAFRLSVMVL GISAILFYYN WQLALLTLVI VPAIAFFTYR FIKAIQPKYA DVRSSVGQLN SRLENNLGGV QVIKTYSTEG YESDRVEDTS RDYFDANWGA ITTRIKFFPG LRVLAGVGFV VTFLVGGLWV YSGEGPWIFT GTLSEGEFVV FILLSQRFIW PMAQFGQIIN MYQRAYASAE RIFGLMDTPS LIEETDDAEE LAVTDGEVEY DGVTFGYGET QSVSEQSSGE GTDPADDEVI LDDVSFTVDG GDTLALVGPT GAGKSTVMKL LMRMYDVNDG AVRIDGQDVR DVTIPSLRDA IGYVSQETFL FHGTVRDNIA YGSFDATDEE IREAAKAAEA HGYIQNLPDG YDTMVGERGV KLSGGQRQRV AIARAILKDP EILVLDEATS DVDTETEMLI QRSLDRLTAD RTTFTIAHRL STVKDADQIV VLEDGSVVER GSHDDLLAED GLYANLWAVQ AGEIDELPEE FVRRATERRS QVDAEVGDDD
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