Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hmuk_0406 |
Symbol | |
ID | 8409904 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halomicrobium mukohataei DSM 12286 |
Kingdom | Archaea |
Replicon accession | NC_013202 |
Strand | + |
Start bp | 395120 |
End bp | 396262 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 645018728 |
Product | peptidase M50 |
Protein accession | YP_003176247 |
Protein GI | 257386474 |
COG category | [R] General function prediction only |
COG ID | [COG1994] Zn-dependent proteases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.445518 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGCTCGT TCAAAGTCGC TCAGGTGTGG GGGATTCCGA TCAAGATCCA CATCTCGTTG CTCGTCGTGT TGCCGCTGTT CGCGTGGCTG CTGGGCAGCG GTCAGCAGAT CGAACTGTAC GCCGGCCTCA TCGAGGGGCT GACCGGAGCA CCGCTCGACA CGGACGCGCT CACCGTCGAC GGCGCGATCC CCTGGATCAT CGGCTCGGCC GCCGCCGTCG GCCTGTTCGC CAGCGTCGCC CTGCACGAGC TGGGCCACGC CTGGGCCGCG CTGCGCTACG ATCTGGAAGT CGAATCGATC ACGCTGTGGA TCCTGGGCGG TCTCGCCAGC CTCAGCGCGA TCCCCCGCGA GTGGAACAAG GAGTTCTGGA TCGCCGTCGC GGGGCCGGCC ACCAGCGTGG TCACGGGACT GGCCTGCTAC GGCGCGCTGT TCGTGATCCC GGCCTCCCAG CCGGTAGTCG TCTTCGTGGT CGGCTGGCTG GCGGTCACCA ACGTCGTGCT CGCGGTGTTC AACATGGTCC CCGCGTTCCC GATGGACGGC GGCCGAGTCC TGCGAGCGCT GCTGGCCCGG AATCGATCCT ACGCCGGGGC GACGCGAACG GCGGCGACCG TCGGGAAGCT GTTCGCGATC CTCTTCGGTG CCGCCGGGCT GCTGGGCGGG TTCAATCCGA TGCTCGTCCT GCTGGCGCTG TTCATCTACG GGGCCGCGAG CAGCGAGTCC CGGACCGTCG CGCTGGGTGA TCTGCTAGAG GGGCTGACCG TCACCGACAT GGCGGCCGCG CCCGACGCCA CCATCGAGGC CGACGCCACG GTCTCGGAGC TGGTGACCCG CATGTTCGCC GACCGCCGCA CCGAGTTCGC GGTCGTCGAG GACGGGGACG TGGTCGGCGT CATCAGCGGC AACGACTTCC GGGCGGTCGC ACCCGAGGAG CGCGAGACGA CGACCGTCGC CGACCTGATG GCGACGGACC TGCCGACCTT CGACGGCTCG ATGTCGGCCT TCGACGCGCT CGTGGCACTC GATCAGGCGC GGGCCAGCGA GGCGTTCGTC ACGACCCCAG AGGGGACCCG CGTCGTCTCG CGGACGGACT TCGCGTCGGC GATGGAGATG CGGAAAGTGC TCGGCCGGGG CGAGCCGCTG TAA
|
Protein sequence | MRSFKVAQVW GIPIKIHISL LVVLPLFAWL LGSGQQIELY AGLIEGLTGA PLDTDALTVD GAIPWIIGSA AAVGLFASVA LHELGHAWAA LRYDLEVESI TLWILGGLAS LSAIPREWNK EFWIAVAGPA TSVVTGLACY GALFVIPASQ PVVVFVVGWL AVTNVVLAVF NMVPAFPMDG GRVLRALLAR NRSYAGATRT AATVGKLFAI LFGAAGLLGG FNPMLVLLAL FIYGAASSES RTVALGDLLE GLTVTDMAAA PDATIEADAT VSELVTRMFA DRRTEFAVVE DGDVVGVISG NDFRAVAPEE RETTTVADLM ATDLPTFDGS MSAFDALVAL DQARASEAFV TTPEGTRVVS RTDFASAMEM RKVLGRGEPL
|
| |