Gene Hmuk_0406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_0406 
Symbol 
ID8409904 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp395120 
End bp396262 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content69% 
IMG OID645018728 
Productpeptidase M50 
Protein accessionYP_003176247 
Protein GI257386474 
COG category[R] General function prediction only 
COG ID[COG1994] Zn-dependent proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.445518 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTCGT TCAAAGTCGC TCAGGTGTGG GGGATTCCGA TCAAGATCCA CATCTCGTTG 
CTCGTCGTGT TGCCGCTGTT CGCGTGGCTG CTGGGCAGCG GTCAGCAGAT CGAACTGTAC
GCCGGCCTCA TCGAGGGGCT GACCGGAGCA CCGCTCGACA CGGACGCGCT CACCGTCGAC
GGCGCGATCC CCTGGATCAT CGGCTCGGCC GCCGCCGTCG GCCTGTTCGC CAGCGTCGCC
CTGCACGAGC TGGGCCACGC CTGGGCCGCG CTGCGCTACG ATCTGGAAGT CGAATCGATC
ACGCTGTGGA TCCTGGGCGG TCTCGCCAGC CTCAGCGCGA TCCCCCGCGA GTGGAACAAG
GAGTTCTGGA TCGCCGTCGC GGGGCCGGCC ACCAGCGTGG TCACGGGACT GGCCTGCTAC
GGCGCGCTGT TCGTGATCCC GGCCTCCCAG CCGGTAGTCG TCTTCGTGGT CGGCTGGCTG
GCGGTCACCA ACGTCGTGCT CGCGGTGTTC AACATGGTCC CCGCGTTCCC GATGGACGGC
GGCCGAGTCC TGCGAGCGCT GCTGGCCCGG AATCGATCCT ACGCCGGGGC GACGCGAACG
GCGGCGACCG TCGGGAAGCT GTTCGCGATC CTCTTCGGTG CCGCCGGGCT GCTGGGCGGG
TTCAATCCGA TGCTCGTCCT GCTGGCGCTG TTCATCTACG GGGCCGCGAG CAGCGAGTCC
CGGACCGTCG CGCTGGGTGA TCTGCTAGAG GGGCTGACCG TCACCGACAT GGCGGCCGCG
CCCGACGCCA CCATCGAGGC CGACGCCACG GTCTCGGAGC TGGTGACCCG CATGTTCGCC
GACCGCCGCA CCGAGTTCGC GGTCGTCGAG GACGGGGACG TGGTCGGCGT CATCAGCGGC
AACGACTTCC GGGCGGTCGC ACCCGAGGAG CGCGAGACGA CGACCGTCGC CGACCTGATG
GCGACGGACC TGCCGACCTT CGACGGCTCG ATGTCGGCCT TCGACGCGCT CGTGGCACTC
GATCAGGCGC GGGCCAGCGA GGCGTTCGTC ACGACCCCAG AGGGGACCCG CGTCGTCTCG
CGGACGGACT TCGCGTCGGC GATGGAGATG CGGAAAGTGC TCGGCCGGGG CGAGCCGCTG
TAA
 
Protein sequence
MRSFKVAQVW GIPIKIHISL LVVLPLFAWL LGSGQQIELY AGLIEGLTGA PLDTDALTVD 
GAIPWIIGSA AAVGLFASVA LHELGHAWAA LRYDLEVESI TLWILGGLAS LSAIPREWNK
EFWIAVAGPA TSVVTGLACY GALFVIPASQ PVVVFVVGWL AVTNVVLAVF NMVPAFPMDG
GRVLRALLAR NRSYAGATRT AATVGKLFAI LFGAAGLLGG FNPMLVLLAL FIYGAASSES
RTVALGDLLE GLTVTDMAAA PDATIEADAT VSELVTRMFA DRRTEFAVVE DGDVVGVISG
NDFRAVAPEE RETTTVADLM ATDLPTFDGS MSAFDALVAL DQARASEAFV TTPEGTRVVS
RTDFASAMEM RKVLGRGEPL