Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hmuk_0259 |
Symbol | |
ID | 8409757 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halomicrobium mukohataei DSM 12286 |
Kingdom | Archaea |
Replicon accession | NC_013202 |
Strand | + |
Start bp | 254568 |
End bp | 257768 |
Gene Length | 3201 bp |
Protein Length | 1066 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 645018584 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_003176103 |
Protein GI | 257386330 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.00761831 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | ATGAGTATGG ACCTGAAGGT AAAGTTGGTC GTGCTGATGT TGGCGATCTC GCTGTTGCCG CTTGGCAGTG TCGGAGCCCT GGCGACACAG AACATGGGGT CGCTCAATCA GGACGCCCAG GATCGGAGCG CACAGGAGTT GCGCGGAGCG ATGACCGACG ACCTGAACAA CAGCGTACGG GCGCGGCAGT CGTCGCTACA GAACCAGTTC GACCAGCGGG AGGTCGACAT GCGCTCGCTC GCCCAGTCGG GCGCGATGGA CAACTATCAG GCCGCTCGAC AGGGGAAGAT GCAACTCGTC CAGGAGGCCA GCCAGCGACA GGTCGGCTAC ACGGCCCTGG AGATGCGCAA CGCCATCGAG AGTACGACCC AGACCGTCCT CGATACCGAG TACGACGGGC GCGAGTGGGA GGAGCTGTCC CCCCGCGAGC AGCGCGCGGT CAAGCAGCGC GTCGAGCGGA TCATCGCCGG CACCGACGGC GACGGGACGA CCGCCGACGG GACGATGGAC GAGACGTTCC AGCCCGGCTA CATCGGCGAG ACCGGCTACG CCTACGTGAC CGACCTGGAC TCGAACGTCG TGGTCCACCA CCGTCTGGAA GACGGGCACA ACTTCGCCGA CGACTCCGGC GGGAGCCTGA CCGTCTTCGA CGACATCAAA GCGAACATCG AGTCGACGCC CGCGCTGCGC AACGGCGAGA CGTGGGGTGT CGCCGAGTAC GAGTGGGAGG ACACGACACA GGACGGCAAC CCCACGGAGA CCCAGCTGGT CGCCTACACC TACTACGAGC CCTTCGACTG GATCGTCGCT CCCAGCGTGT ACTACTACGA ACTCCAGGAG CGAGCCGTCG CCGACAGCGA GGCGCGGCTG GCAGACTCCT TCGAGCAGTA CCTCGAAACG CGGACTGTCA GCGTCAATCG GGAACAGCGC TACGCCTACG ACGAGATCAT CTTCGTCGAC AAGCGGGGCC GAGAGGTCAT CAGTGCCACT CGCGAAGGCG AACGGGCAGT GACCGAGCGC GACGGTTCGG GGTGGCACGC CGACAAGAGC TGGTTCACCA GTGCCGGTGC CGTCGCCAAC GGCGAAGTCG CGTTCAACCG AATCGAGGAA GAGAACGGCA GTCAGCGGAT GTACGTCTCG ACGCCGGTGT ACCAGGACGG ACGGTTCCGG GGCGTCGTCG TGGCCCAGTT CAACTACTCG ATCGTCACGG AGATCACGAA CGGCGTGTCG GTCGGCGAGA CGGGCTATCT CTACGTCGTC AACGACCGCG GCGAGATGGT GAGCCACCCC AACGAGACGA AGGTGGCACA GCGCGTCGAC GTGGCCGGGG GTGAGTACGG CGAGGAACTC GGCAACATCA CCACCGAACA GATGCTGGCC GCCCGGTCGG GCATGGCCAC ACACACGCGA ACGGTCGGGG GCGAAGAGAC GACCCGATAC GTCGTGTACG CGCCCCTGCA GGTCGGAGAC AGGCAGTTCT CGCTCGTCGG CACCGTTCCC GAGAGCGACA TCGAGGGGCC GATCGCGGCG CTGGGAGACG CGCTCCAGCA ACGCACCGAC GACGCCCGCA ACCTCATCCT GTTGCTGTCG GGCATCGCGG CGCTGGTCGT CGTCGCCGCG GGCTACGCCG TCGCGCGTTA CGTCGCCAGT CCGATCGAAC AGATGCGCGA CCGGGCCACG GAGATGGCAC AGGGGCGGTT CGACGGCGAA CTCGACGTGG ACGACCGCGA CGACGAGATC GGGGAGATGG TCGAGGCCTT CGAGGAGATG GAGGCGAACC TGACCCGTCA GATAACGGAG ATCGAGGCCG TGTCGGCGTC GCTCAGCGAG GGCGAGATCG ACGACGACCT CCACACGGAC CTGCCGGGCT CGTTCGGCGA CATCATGACG GACCTCCAGG ACGGCATGAC ACAGCTGCGG ACGAGCTTCG CCCAGATCAG CCGGGCCAGT GAGAACGTCC GGACCGGCAA GCTCGACCAG GAGATCGACA GCGACCTCCC CGGAGAGTAC GGCGCGGTGA TGGACGAACT CGACGCGGGA CTCCAGCAGC TCTCCGAGAG CTTCGACCGG CTCCGGACGG CGAGTACGGC ACTCAGCGAG CGCCGGCTCG ACGAGGACCT CGGTACCGAC CTGCCCGGCG CGTACGGCGA CGTGATGACC AACATCGACG CGGGGCTCGA CGCCGTCGAG GAGAGCATCG CGCGGGTGCA GTCGATCGCA CGGGAGGTGA GTTCGGCCAC CGACGACGCC GCGGCCAGCG CACAGGAGGT CGAGCGGGCC AGCCAGGAGG TCGCCGAGTC CGTGCAAGAG ATCTCTCACG GCGCGGACCG CCAGTCCGAA CAGCTCCAGG AGGCCGCCGC GGAGATGAAC GACATGTCTG CGACGGTCGA GGAGGTCGCC TCCTCCGCGG TCGACGTGGC CAACACGTCA GAACGCGCCG CGGACCGCGC CGAGGCCGGG AGCGAGCGGG CGAGCGAGGC CTCCCGCGAG ATCGAGGGGA TCGAAGCGGA GACCGAGCAG GCGGTCGAAC AGGTCGCGGC GCTCGAATCC GAGATCGACG AGATCAGCGA GATCGTGAGT ATGATCACCG ACATCGCCGA GCAGACGAAC ATGCTGGCGC TGAACGCCTC TATCGAGGCC GCTAGAGCCG GTGAGGCCGG CGAGGGCTTC GCCGTCGTCG CCGACGAGAT CAAGGGGCTG GCCGGCGAGG CCGCCGCGGC GACAGAGGAG ATCGACGGTC TCATCACCGA GCTACAGGCG ACGACCGGGG AGACCGTCGA CGACATCGAG TCGATGCGCG ACCGCGTCGA GAACGGTGCC GACACGATCG AGGACGCGAT CGCCATGTTC GACGAGATCG CCGAGAGCGC AACCGAGGCC GAGCACGGCG TCCGAGAGAT CAGCGAGGCG ACCGACGACC AGGCCGCCTC GACCGAGGAG GTCGTCGCGA TGGTCGACGA GGTCAGCAGC GTCAGCCAGC AGGCCGCGGC CGAGGCGACA AGCGTCTCCT CGGCGGCGGA GGAACAGGCC GCATCGGTCA ACAACATCTC CCAGAACGTC CGCTCCGTCG CCGACATGGC CGACGATCTC GAAGCGCTGG TCGAGGCCTT CGAGGTCCAG CAGTCCGCGG CCGACGGCGA CGCGAGCGCA GCGGGAGCCA GCGCCGACGG CGGCTGGTCG CCCGACGACG GCGCGGAGTG A
|
Protein sequence | MSMDLKVKLV VLMLAISLLP LGSVGALATQ NMGSLNQDAQ DRSAQELRGA MTDDLNNSVR ARQSSLQNQF DQREVDMRSL AQSGAMDNYQ AARQGKMQLV QEASQRQVGY TALEMRNAIE STTQTVLDTE YDGREWEELS PREQRAVKQR VERIIAGTDG DGTTADGTMD ETFQPGYIGE TGYAYVTDLD SNVVVHHRLE DGHNFADDSG GSLTVFDDIK ANIESTPALR NGETWGVAEY EWEDTTQDGN PTETQLVAYT YYEPFDWIVA PSVYYYELQE RAVADSEARL ADSFEQYLET RTVSVNREQR YAYDEIIFVD KRGREVISAT REGERAVTER DGSGWHADKS WFTSAGAVAN GEVAFNRIEE ENGSQRMYVS TPVYQDGRFR GVVVAQFNYS IVTEITNGVS VGETGYLYVV NDRGEMVSHP NETKVAQRVD VAGGEYGEEL GNITTEQMLA ARSGMATHTR TVGGEETTRY VVYAPLQVGD RQFSLVGTVP ESDIEGPIAA LGDALQQRTD DARNLILLLS GIAALVVVAA GYAVARYVAS PIEQMRDRAT EMAQGRFDGE LDVDDRDDEI GEMVEAFEEM EANLTRQITE IEAVSASLSE GEIDDDLHTD LPGSFGDIMT DLQDGMTQLR TSFAQISRAS ENVRTGKLDQ EIDSDLPGEY GAVMDELDAG LQQLSESFDR LRTASTALSE RRLDEDLGTD LPGAYGDVMT NIDAGLDAVE ESIARVQSIA REVSSATDDA AASAQEVERA SQEVAESVQE ISHGADRQSE QLQEAAAEMN DMSATVEEVA SSAVDVANTS ERAADRAEAG SERASEASRE IEGIEAETEQ AVEQVAALES EIDEISEIVS MITDIAEQTN MLALNASIEA ARAGEAGEGF AVVADEIKGL AGEAAAATEE IDGLITELQA TTGETVDDIE SMRDRVENGA DTIEDAIAMF DEIAESATEA EHGVREISEA TDDQAASTEE VVAMVDEVSS VSQQAAAEAT SVSSAAEEQA ASVNNISQNV RSVADMADDL EALVEAFEVQ QSAADGDASA AGASADGGWS PDDGAE
|
| |