| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hmuk_0142 |
|---|
| Symbol | |
|---|
| ID | 8409639 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halomicrobium mukohataei DSM 12286 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013202 |
|---|
| Strand | - |
|---|
| Start bp | 144354 |
|---|
| End bp | 144899 |
|---|
| Gene Length | 546 bp |
|---|
| Protein Length | 181 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 645018467 |
|---|
| Product | 4-diphosphocytidyl-2C-methyl-D- erythritolsynthas e |
|---|
| Protein accession | YP_003175987 |
|---|
| Protein GI | 257386214 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2266] GTP:adenosylcobinamide-phosphate guanylyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 44 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.854914 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGGCG GCCGAGGCAC CCGCCTCGAC ACCGACGGCG AGAAACCGCT GTCCCCGGTC
GCCGGCCGTC CGCTGATCGA CTACGTGCTC GACGCGCTCG ACGCGAGCGG CGTCGCGTCG
GTCGTCGTCG CGACCTCGCC GTCGACGCCC GAGACGGCGG CCCACGTCTC CGCCCCGATC
GTCCAGACGC CGGGCGAGGG ATACGTCGCC GATCTCGACG CGGCGCTGGC CGACGACAGA
CTGGCCCGAC CGACGCTCAC CGTGGCGGCC GATCTCCCCC TGTTGACCGG CGCTGTTCTG
GACCGGCTCC GTCGCGCCCA CGAGTCGGGA TCGCTCACCG TCGCCGTTCC GGCCGCCCGC
AAACACGAGC TGGGGGTCAG CGTCGACACG ACGTTCGACC ACGACGGTCG GACCGTGGCA
CCGACCGGCG TCAACGTCGT CGGCGGCGAG CCGTCCCGCA CGCTCGTGGT CGACGAGCCC
CGGCTGGCTG TCAACGTCAA CCGTCCGGGC GACGCGGCCG TCGCCCGCGA GTGGCTCCGT
TCCTGA
|
|---|
| Protein sequence | MAGGRGTRLD TDGEKPLSPV AGRPLIDYVL DALDASGVAS VVVATSPSTP ETAAHVSAPI
VQTPGEGYVA DLDAALADDR LARPTLTVAA DLPLLTGAVL DRLRRAHESG SLTVAVPAAR
KHELGVSVDT TFDHDGRTVA PTGVNVVGGE PSRTLVVDEP RLAVNVNRPG DAAVAREWLR
S
|
|---|
| |