Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_3530 |
Symbol | |
ID | 7402373 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012030 |
Strand | - |
Start bp | 276752 |
End bp | 277999 |
Gene Length | 1248 bp |
Protein Length | 415 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643710068 |
Product | L-carnitine dehydratase/bile acid-inducible protein F |
Protein accession | YP_002567634 |
Protein GI | 222481398 |
COG category | [C] Energy production and conversion |
COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCGAAG ACAAGCGGAT ACTCGACGGT ATAAAGGTAC TAGATTTGAC AACTTTTGTC ACCGGGGGGT TTGCGACACT AATGCTCGCA AATCAGGGTG CAGAAGTCGT CAAGATAGAA CGGCCGGGCG TCGGCGACGA CAACCGCTAC TCGGGACCGC CGTTTGTCCA GGTCGACGAC GACGAGTTAC CGGGACGCTC CGCAGCCGAA GAAGGGGAAT CGCCGTACTT CTGGACAATT AACTACGGGA AAGAGAGCGT GGAACTCGAC CTCAAATCCA GCGAAGGGAA GGAGATACTG TACGAACTGG CCGCTGAGGC CGACGTCTTC GTCGAAAACT TCCGGCCGGG GACAGCAGCG AAGCTCGGTG TCGATTACGA GACCATCAAA GAGTACAACG ACTCGATAAT CTACTGCTCG ATCTCCGCCT TCGGTGAAAC CGGGCCCTGG AGCGACCGTC CCGGTTACGA CCTCCTGGCA CAGGGGATGG GCGGACTGAT GGACGTGACG GGCTACCCGG ACGGGGACCC CGCAAAAGTG GGCATCCCGC AGACGGACCT TATTACCGCG ATGTGGGCCG CCTTCGGTAT CGTCAGTAGC CTCTTCAGTC GGGAGTTGAC AGGCGAAGGT GACCGAGTCG AACTCGGGAT GCTCGACGCG ACGCTCCCGT GGCTGACCAA GCAGGCAGGA AAATCGTTCG TAGGCGAAGA GCCAAAGCGG ATGGGAACGA AAGACCCGGT TCTTGCGCCG TACCAGATGT ACTCCACGAA AGACAGCTAC CTCAACGTCG CCTGTGGAAA TCAGCGTCTC TGGGAACAAC TCTGTGACGC CATCGACCGT CCAGAGCTGA AATCGGACGA GCGGTTCGCG TCGAACAGCA AGCGAGTGGA GCACATGGAC GAACTGGAGG AAGAGCTCAC CGCTACCTTC GAGACCCAGA CGACCGACGA GTGGGTGGAA CTGCTGGCCG AAGAGCACGA ACTGCCGGTC GGTCCCGTCT TCGATGTCGG GGAGGCCCTG ACGAACGAGC AGGTCGAAGC TCGGGGTGCC GTGACGACAC TGGAACATCC GGCCGCCGGC GAGATTCAGG TACTCGAACA CCCCCTCAAC TTCGAAAACT CGGAGTCCGG GTTCCGAGAG GCACCACCGT TGCTGGGCGA AGATACGGAG GCAAAACTCC GGGACCTGGG ATACGACGAC GCGGAAATCG AGCGATTACG AGCAGAGGGA GTTGTTCCCT CCGAATAG
|
Protein sequence | MSEDKRILDG IKVLDLTTFV TGGFATLMLA NQGAEVVKIE RPGVGDDNRY SGPPFVQVDD DELPGRSAAE EGESPYFWTI NYGKESVELD LKSSEGKEIL YELAAEADVF VENFRPGTAA KLGVDYETIK EYNDSIIYCS ISAFGETGPW SDRPGYDLLA QGMGGLMDVT GYPDGDPAKV GIPQTDLITA MWAAFGIVSS LFSRELTGEG DRVELGMLDA TLPWLTKQAG KSFVGEEPKR MGTKDPVLAP YQMYSTKDSY LNVACGNQRL WEQLCDAIDR PELKSDERFA SNSKRVEHMD ELEEELTATF ETQTTDEWVE LLAEEHELPV GPVFDVGEAL TNEQVEARGA VTTLEHPAAG EIQVLEHPLN FENSESGFRE APPLLGEDTE AKLRDLGYDD AEIERLRAEG VVPSE
|
| |