Gene Hlac_3516 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_3516 
Symbol 
ID7402360 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012030 
Strand
Start bp260389 
End bp261561 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content57% 
IMG OID643710055 
Producttransposase IS4 family protein 
Protein accessionYP_002567621 
Protein GI222481385 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTCACAA TTCCTCAGCC AGACGGGCAT CTTTCAGCCA CAGACGTGAA AGAACTAGCG 
GAAGATATCG TTGAACAGCT CCCGCTGCCG GGAATCGAGG GCTCGCCCCT CGATTCCGGC
GAGATCTGGG CCGTCGTTAC CCTTGCAGCA GTCAACCAGA CTTCTGTCTG GGAAACCTGC
AAAGACAACG ACAACGCTCC CTGTGACGAT ACTGTCATGG ACTGGCTCCA TACTCTCAAC
CGAGAGTGGC TAGAGCGGAT TGCTAACGAC CTACTGAAGG AGATGGCAAT GACGATCCTC
GACCCCGACC GGTCGAGGAT AGTCTCCATT GATTTCGTCG ATAACCCCTA CCACGGGACG
TACGCCGATG AGAGCGGCGA ACTCTGTCGG ATGGCTGCTA AAGACGGTAC AACAACGTGT
CACCGCTACT GCTCAGCATA CCTCGTTTCA AACGGGAAGC CGGTGACGCT GGCTATGACG
TACGTGCGGA GTGATGAGAG TGAGGCTGAC GCGGTCGAGC GTGTCCTCGA CCGCGTCGAG
GCCTATCCCT TCGATATAGA CCTTTTGTTG GCTGATCGCG GCTTCTACAA CGAACGTATC
CTACGTCGGT CACATGACAT CGCTGCGACT GTCGTTCCCG TCCAAAAGAA GGGTAAACGC
ATGAAGAAGA AGCTAGACAC GCATTGTTCG TACATGACGA CCTATCGGAT GTACAAAGAC
TGCAAGCGGG AACTGAAATT CCCACTTGCA GTCGCTGTCT CCTACCAAGC CGGAGATCGT
GGCAAGAGCG GAGAGGTCGT TAGAGGGTAT GTGGCGTGCG ATCTGGCTGA TCGCACGCCG
AAGCGGGTCG AACAACTCTA TCGGAAACGC TCAGCGATTG AGACCAGCTA TCGCGTATTC
CGCCAAGCAC GGGTGGTAAC GACGACTCAG GATTCAATCG TCCGCTTTGG GTTCGTCTTG
GTTGGGTTCT TGCTGGAGAA CCTCTGGCTC GTGCTTCGGT GGGCGGTCGT CGCCCGCCCA
CGGCGGGGCG GGCGCGACCT ACCCGAAGAG TTCACGTTCA AGACCTTCTC TGACTGGATC
AGACACGCAT TAGAGGAGGA ACTTGAGCGG AGTTGGGAGA TCAAAATGAA CGGCGTCGGT
GTGCCGGAAG CGTACGCAGC GGCCGCGGGC TGA
 
Protein sequence
MFTIPQPDGH LSATDVKELA EDIVEQLPLP GIEGSPLDSG EIWAVVTLAA VNQTSVWETC 
KDNDNAPCDD TVMDWLHTLN REWLERIAND LLKEMAMTIL DPDRSRIVSI DFVDNPYHGT
YADESGELCR MAAKDGTTTC HRYCSAYLVS NGKPVTLAMT YVRSDESEAD AVERVLDRVE
AYPFDIDLLL ADRGFYNERI LRRSHDIAAT VVPVQKKGKR MKKKLDTHCS YMTTYRMYKD
CKRELKFPLA VAVSYQAGDR GKSGEVVRGY VACDLADRTP KRVEQLYRKR SAIETSYRVF
RQARVVTTTQ DSIVRFGFVL VGFLLENLWL VLRWAVVARP RRGGRDLPEE FTFKTFSDWI
RHALEEELER SWEIKMNGVG VPEAYAAAAG