Gene Hlac_3224 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_3224 
Symbol 
ID7398905 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012028 
Strand+ 
Start bp472276 
End bp472956 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content54% 
IMG OID643707020 
Producttransposase 
Protein accessionYP_002564642 
Protein GI222476121 
COG category[L] Replication, recombination and repair 
COG ID[COG3316] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTATCCC CAGAACTGCT CAGAGAGTCG TTAGACACGG CAAATCTTGA ATGTTGGGAG 
CGAGAGCGGA CGGCGACGCC CGTCAGGGCG TTCGCCGTCC GGCTCCACGC GACCGGTTGT 
TCGCTCAGAG AAACACAAGC AATTCTGCGA TTATTCGGCG TCCAACGCTC TCACCAGGCG 
ATCTTTCAGT GGGTACATCG AGTAGCTGAC AGCGTTCCCG ACCCGCCTGA GGCGCAGCCG 
AAGCGGGTCG CTGTAGACGA GACCGCTGTC AAAATTAATG GCGAGTGGTC TTGGTTGTAT 
GCTGCAATAG ACCTCGACAC CAAGTTGATT TTAGGTGTCG ATCTGTTCGG ATCTCACGGT 
ACCGATCCAG CTGCTGCGTT TCTGCATAGA CTCTCTGAGA AACACGACCT CTCCGAGGCC 
GTGTTTCTCG TCGATGGCTT CGGCTATCAG ACTGCCCTTG CTCGATTAGG ACTCAGCGGT 
CGGCGTGATT ATACAGACCG AAACCTGATC GAAAAATGGT TTCAAACGCT CAAAATGAGG 
ATCGACCGCT TCCATAATTC GTGGGTGGGC AGTCGGTCGA GCGTTCGTAG CTGGTGTTCG 
CAGTTTACAC ATTATTATAA CCGCCAGCGA CCGCATCAAT CGCTAGATGA TCGAACGCCA 
GCTGAGGAGG TCGCTAACTA G
 
Protein sequence
MLSPELLRES LDTANLECWE RERTATPVRA FAVRLHATGC SLRETQAILR LFGVQRSHQA 
IFQWVHRVAD SVPDPPEAQP KRVAVDETAV KINGEWSWLY AAIDLDTKLI LGVDLFGSHG 
TDPAAAFLHR LSEKHDLSEA VFLVDGFGYQ TALARLGLSG RRDYTDRNLI EKWFQTLKMR 
IDRFHNSWVG SRSSVRSWCS QFTHYYNRQR PHQSLDDRTP AEEVAN