Gene Hlac_2987 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_2987 
Symbol 
ID7398964 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012028 
Strand- 
Start bp247103 
End bp247768 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content64% 
IMG OID643706797 
Producttranscriptional activator, TenA family 
Protein accessionYP_002564419 
Protein GI222475898 
COG category[K] Transcription 
COG ID[COG0819] Putative transcription activator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGTTCA CGGACGAAAT CCGCGAGGAA GCCGATCGAA TGTGGGAGGC CATCCTCGAC 
CATCCGATGG TCCGCGAGCT CGGCCAGGGG ACGCTCGACG AAGCGCCGTT TCGGTACTGG 
GTCCGGCAGG ACTACGTTTA CCTGATCGAG TACAGCCGGC TATTCGCACT CGGCGCCTCG 
AAGGCGTCCA CGCTCGACCA CATGGGAACG TTCGCCGACC TCCTCGAATC GACCGTCACC 
GTCGAGATGG ACCTCCATCG CTCGTACGCT GAAGAGTTCG GCATCGGCGA AGCCGAGCTG 
GAAGCCACGA CTCCGTCGCC GACGACGCGT GCATACACCG ACTTCCTCGT GCGCACCGCG 
GCGCTCGGAA CGTTCGGTGA TACTGTGGCC GCCCTCCTGC CGTGCATGTG GGGATTTAAC 
GAAACGGGCA CGCGCCTCGC TGCGAGCGGC GAGTCGGACG ACGAGCGGTA CGCCACGTGG 
ATCGACATGT ACTCGGGCGA GGAGTTCACG GAACTCACGG ACTGGTGCAA GGGACTGATG 
AACGACGTAG CCACTAATGC GACCGAGAGC GACCGTGAGC GTTACCGCGA GTTGTTCGTC 
ACGTCGGCGC GCTACGAGTA CCGGTTCTGG GACGCCGCAT GGCGCCAGGA GGCGTGGGAG 
GTGTGA
 
Protein sequence
MTFTDEIREE ADRMWEAILD HPMVRELGQG TLDEAPFRYW VRQDYVYLIE YSRLFALGAS 
KASTLDHMGT FADLLESTVT VEMDLHRSYA EEFGIGEAEL EATTPSPTTR AYTDFLVRTA 
ALGTFGDTVA ALLPCMWGFN ETGTRLAASG ESDDERYATW IDMYSGEEFT ELTDWCKGLM 
NDVATNATES DRERYRELFV TSARYEYRFW DAAWRQEAWE V