| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_2515 |
|---|
| Symbol | |
|---|
| ID | 7401567 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorubrum lacusprofundi ATCC 49239 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_012029 |
|---|
| Strand | - |
|---|
| Start bp | 2493838 |
|---|
| End bp | 2494455 |
|---|
| Gene Length | 618 bp |
|---|
| Protein Length | 205 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 643709587 |
|---|
| Product | manganese and iron superoxide dismutase |
|---|
| Protein accession | YP_002567158 |
|---|
| Protein GI | 222480921 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0605] Superoxide dismutase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.24618 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.282222 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAATGA ATGTAGACAT GAGCTACGAA CTTGATCCGC TGCCGTACGA TTACGACGCA
TTGGAGCCGC ACATTTCCGA GCAGGTGCTC GAATGGCATC ACGACACTCA CCACCAGGGC
TACGTGAACG GGTGGAACTC GGCCGAGGAG ACGCTTGAGG CGAACCGCGA CGCTGGAGAC
TTCTCATCGT CGGGCGGGGC GATCCGAAAC GTGACCCATA ATTCGTCGGG TCACATCCTG
CACGATCTGT TCTGGCAGAA CATGAGTCCG GAAGGCGGCG ACGAGCCTGA AGGCGCACTT
GCCGACCAGA TCGAGGAGGA CTTCGGCTCG TACGACGCCT GGAAGGGCGA GTTCGAGGCG
GCGGCGTCCG CCGCGTCCGG CTGGGCGCTC TTAGTGTACG ACACGTTCTC GAACCAGCTG
CGGAACGTCG TGGTCGACAA GCACGACCAG GGCGCGATCT GGGGCGGCCA CCCGATTCTC
GCGCTGGACG TATGGGAACA CTCCTACTAC CACGACTACG GCCCGGCTCG TGGCGAGTTC
GTCGACAACT TCTTCGAGGT CGTCGACTGG AACGAGCCCG CGACCCGCTA CGAGCAGGCC
GTCGAGCTGT TCGAGTAA
|
|---|
| Protein sequence | MEMNVDMSYE LDPLPYDYDA LEPHISEQVL EWHHDTHHQG YVNGWNSAEE TLEANRDAGD
FSSSGGAIRN VTHNSSGHIL HDLFWQNMSP EGGDEPEGAL ADQIEEDFGS YDAWKGEFEA
AASAASGWAL LVYDTFSNQL RNVVVDKHDQ GAIWGGHPIL ALDVWEHSYY HDYGPARGEF
VDNFFEVVDW NEPATRYEQA VELFE
|
|---|
| |