Gene Hlac_2470 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_2470 
Symbol 
ID7401522 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp2448558 
End bp2449160 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content67% 
IMG OID643709542 
ProductAMMECR1 domain protein 
Protein accessionYP_002567113 
Protein GI222480876 
COG category[S] Function unknown 
COG ID[COG2078] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00296] uncharacterized protein, PH0010 family 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGAGG CCCAGACCGT TCAGCTGTCG TACGACGACG GTGCACGAGC GGTCGAACTC 
GCGCGGGAGG CGGTCGAGTC GTTCGTCCGA CACGGACAAC GCGAACAACC CGGGAGCATG
CGCGAGGCGT TCTATGCCCG AACTGGCGCG TTCGTCCGGT TGGAGTCCAC GAGAGGTCGC
GGCCGGCTCC GCGGCTGTGC CGGCGCGTGG GAGACCTCCG ATCAGCTCGG TCACGCAATC
GTCGAGGCCG CCATCAAGGC CGCCTCCGGC GATTCCTGCG GCTCCGAGGT CGAGCCCAAG
GAACTCGACA ACATCACCGT CTCCGTGTTC ATCGTCTCGA ACACGGTACT CACCAACGAT
CCCCTCGCTG ACCTGAAAGT CGGCACCCAC GGCGTCGCCG TCGACGGCGG CAACTCCCAC
GGCTGGCTCT ATCCGACGGT CCCCGTCGAG AACGGCTGGT CCGGCGCCGA GTTCCTCTCC
CGCGCCTGCC GGAAGGCCAA AATCGCCCCG AACGCGTGGG AAGACGACGA GACGATGGTG
ACGCTCATCG AGGGACAGGT GTTCCGAGAG CGCGCCGACG GCGGCGCGGT CGAAGAGCTA
TAA
 
Protein sequence
MSEAQTVQLS YDDGARAVEL AREAVESFVR HGQREQPGSM REAFYARTGA FVRLESTRGR 
GRLRGCAGAW ETSDQLGHAI VEAAIKAASG DSCGSEVEPK ELDNITVSVF IVSNTVLTND
PLADLKVGTH GVAVDGGNSH GWLYPTVPVE NGWSGAEFLS RACRKAKIAP NAWEDDETMV
TLIEGQVFRE RADGGAVEEL