Gene Hlac_2389 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_2389 
Symbol 
ID7400507 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp2384086 
End bp2384982 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content63% 
IMG OID643709462 
Producthistidine kinase 
Protein accessionYP_002567034 
Protein GI222480797 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0317166 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTAG AATCTGATTT CATCTTCGGC CGGTCTCCGC GGGGGCTCAC CGTCGCGTAC 
CTTTGTCTTG GAGCGCTGTT CGTCCTCGCA ACCGACCTCG CAGTCGTGTC CATGGTCGGA
TCGCTTTCGA CGTGGACGCC GGTTCACGCC GTTGACGGGT GGCTGTTCGT CAGCATCTCG
TCGCTGGTCT TCTACGGCGC GACGGCGTAT CAGAAGCGCC GGGCGGCCGC CGCCCGGCGC
GAGCTAGAGA CGTCGAACCA GCAGCTCCAG GTATTGAGTC GGGTTTTCCG ACACAACGTG
CGAAACGATC TCAATGTCAT TCAGGGGTAC ACAGACCTAC TCGCCGAGCG GGTCGACGAC
GAACGGAGCC GGGAATGCCT AGAAACGATC CGGGAGACGA CCGACGACGT GGTGGAGATT
AGCGAGAAGC TGCGCGTCAT CGAGGATGCA TCACCGACTC CTCCGAGTGG GCGAGTCGAC
CTCGTCGAGG CGGTTCGCGA GGCTGCCACG GGTGTCGACC GCACAGACGT CTCACTCACC
CTCGACGCAC CCGCCGAGGC GTGGGTCCAT GCGGACGAGT CGATCGAGTA TCCGATCCAA
GAGGTGTTCG AGAACGCCGT CACCCATAAC GACGAGTCGG TGCGCCGGAT CGACGCCCGC
GTCACGGAGA ACGGGTCGAC GGCCTGTCTG GAAGTCAGTG ACAACGGGCC GGGGATCCCC
GCCGACGAGC GAGCAGTGTT GCGCGCCGAA GAGGAGACGC CGCTGTCGCA CGCAAGCAGC
ATCGGGCTGT GGCTCGTCAA GTGGATGTGC GAGACGCAAG GCGGAACGGT CAGGTTCGAG
ACGACCGACG ACGGGACGAC GGTCCGGCTT CGATTCGACT CGGTCGACAA CAGCTGA
 
Protein sequence
MKLESDFIFG RSPRGLTVAY LCLGALFVLA TDLAVVSMVG SLSTWTPVHA VDGWLFVSIS 
SLVFYGATAY QKRRAAAARR ELETSNQQLQ VLSRVFRHNV RNDLNVIQGY TDLLAERVDD
ERSRECLETI RETTDDVVEI SEKLRVIEDA SPTPPSGRVD LVEAVREAAT GVDRTDVSLT
LDAPAEAWVH ADESIEYPIQ EVFENAVTHN DESVRRIDAR VTENGSTACL EVSDNGPGIP
ADERAVLRAE EETPLSHASS IGLWLVKWMC ETQGGTVRFE TTDDGTTVRL RFDSVDNS