| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_2327 |
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| Symbol | |
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| ID | 7401944 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | - |
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| Start bp | 2322485 |
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| End bp | 2325343 |
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| Gene Length | 2859 bp |
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| Protein Length | 952 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643709400 |
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| Product | TRAP transporter, 4TM/12TM fusion protein |
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| Protein accession | YP_002566973 |
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| Protein GI | 222480736 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4666] TRAP-type uncharacterized transport system, fused permease components |
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| TIGRFAM ID | [TIGR02123] TRAP transporter, 4TM/12TM fusion protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.648289 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACGA CCAATCGAAC CGACGGCGGT ATCGACGACT CGAACGACGG CGGCTCCGGA
GGGCCACCCC CCGGCGACCT CGGCAGCGGT TCGGGCGCGG ACGAGCCGCC GGACGACAGG
ACGGACGAGG AGATCTCCCG CGAGGAGGCG GACGATCTGA TAGAGGAGAT CGAGCGCCGC
CGCTCGCTGC GGGGACCAGC CGCGATAGCG GTCGCGATCA TCGGAATCGC GTTTTCCGTC
TTCCAGTTAT TCCTCGCCGC CCGGAGCTAC ACGTTCACGA TCTGGCTCCC GACCGTCGAT
ATCGCGGGGA TCTCGATCGC CCCCTGGCAG GTCTCGCTCC AGCTCCTGCA GGCGAACGCG
ATCCACGTCG CCTTCGCGCT CGTGCTCACC TTCCTACTGT TCCCGGTGAG CACCGGCGAC
GGGATGGTCA CGCGGAATTT CGGTCGGATC GCCCCGGCGG CGTCGCAGCG CCTCGGCGAC
CGGAGTCCTG TCACGCGGGC GCTCGAAGGA GGTCGGACGG GGCTTCGCTG GGCGTTCCTC
GACCCCGACC GCGAGCGGGT GACTCCGGTC GACATACTGT TCATCGCCGT GGCGTTCCTC
TCGGCGTTCT ACTTCATGAC GGAGTTCGCG GAGATCCAGA ACATGCGCGT CTTCGGGGTC
GACTCGGGGC GGCCGGTTAC CGAGGTGTAC GCGTTCCTCC AGCCCCTGCT CGGCGGCGTC
CCGTTCGTGA GCGAGTACTC CTACGCGATG ATTCTGGGCG TGGCCGGCAT CCTGCTGGTG
TTGGAGGCCA CCCGCCGGAC GCTCGGCCTC CCGCTGATGC TCATCGTCGC CACGTTCATC
GTCTACGCCC GCTGGGGCTA CCTCATCAGT GGGGACACCC CGTTCCTCGG CCTGCTCGCG
ATCCCGCCGC TCTCCTGGCC GGATATCGTT CAGAACCTCT GGTACAACAC CGAGAACGGG
GTGTTCGGTA TTCCGGTGAC GGTGTCGATG AGCTTCATCT ACATCTTCAT CCTGTTCGGC
TCGTTCCTCG AGATGAGCGG GGCCGGCCAG TGGTTCATCG ACCTCGCGTA CGGGCTCACC
GGGGATCGTA AAGGCGGCCC GGCGAAGGCG AGCATCCTCG CCAGCGGGTT CATGGGAACG
ATCTCGGGGT CGTCGATCGC CAACACGGTC ACGACCGGCG CGTTCACGAT CCCGCTGATG
AAGCGGTCGG GCTACGATCC CGAGTTCTCC GGCGCCGTCG AGGCGTCCGC GTCGTCCGGC
GGGCAGATCC TCCCGCCCGT GATGGGGGCG GCCGCCTTCC TGATGGTCCA GTACACGTCG
ACGCCGTTCG CCGACATCAT CATCATCGCG ACGATCCCGG CGATCGTCTT CTTCTTCGGC
GTCTGGGTGA TGGTCCACCT CAAGGCGGTC CAAGAGGGGA TCGGCGGCGT CTCCGGCGAG
GACACGGTTA ACTTCTGGGA CCACTTCAAA CGCGGCTGGT TCTACCTCGT GCCGATCGCA
CTGCTCCTGT ACTACCTCAT CATCGAGCGG CTCTCGGTCT CCCGGTCGGC GTGGTTCACG
ATCGTGGCGC TCGTGGCGCT GGTCGCGCTC GTCTCGGCGT ACAGCGAGGA GACGCGGCTG
CGCCTCTTCG CCGTCTTCGC GGCGATCGTC GGCGTCGAGT TCGCGAGCCA CGCGCTGGCC
GGCGTGAACG TCGTCGGCCT CGTCACCGGA GCCGGCGGTG CGGGGCTCCC GCCCGGCGAG
GCGTTCAGCG CCATACTTGC GGGGATCGAG TGGTACGCAA TGCTCGCCGG GGTGCTCACG
CTGCTGTCCA AGCCCGATCT CGACGCGTCG CTGCTCGAGC TCAACCCCTC GGTTCAAGAC
ACGGCCGAGA CGATCGGCGA CCGGACCGAC CGGGACTTAG AGAACAGCCA GCCGTTCAAA
CTCGGCACCT TCGTGGTCAC GTCGATGGAG CAGGGCGCGC GCACCGCGGT CCCGGTCGTG
GTCGCGGTCG CGGCCGCGGG GATCATCCCC GGCGTCATCA GCGTCTCCGG GCTCGGCCCT
AACCTGACCT CGCTGCTGTT AGCGCTCTCT GGGGGGTCGA TCGTGATCAT GCTGCTCGTG
ACGGCCGTCT CGAGCATCAT CCTCGGGATG GGAATGCCCA CGACGGTCAC CTACATCATC
CTCATCTCGA TGCTCGCGAC GCCGCTCGTG GAGTTCGGTA TCCCGCTTCT GGCCGCCCAC
CTGTTCATCC TCTACTTCGG CGTGATCGCC GACATCACGC CGCCGGTGGC CGTGGCGGCG
TACGCCGCCA GCGGGATCGC CAAGTCCGAT CCCTTCGAGA CCGGCGTGAA GGCGTTCTCG
CTGTCGCTGA ACAAGGCGAT CGTCCCCTTC GCGTTCGTGC TCGCGCCGGG GATCGTCCTG
CTGCGCGAGA AGGCGAACGC CGCCGACCTG CCGATCCGCG AACAGTACCG CGTGGTCGGG
TTCGCGGACC TCGCCGAGCT GTCCTACTCG GTCCCCGAGA TTCTCATCCC CATCGCCGGG
GTCTTCCTCG GCGTGATCGC GCTCGGCGCG ACCGTCATCG GGACACTGTA CACGCGTGTC
GGCCGGCTCA GTCGGGCCGT GTTCGCCCTC AGCTCGCTGC TGTTGATGGC GCCGGGGCTG
CTCTCCGAGA GCGTCTTCGA CACGCTCGGG CTCGTTGGCG TGAGTGTCTC CGTCAACGCG
CTCCTGCTTG ATTTGACCCT ACGCGCGGTC GGGTTCGTCC TGTTCGTGCT GTTCGCGCTC
CGGAACCGAC GGACGCTCGA CGGCGAGGGC GACGGAGCGG GAGAGACCGA CGCGACAACG
GGATCGACCG AGGCCGTCGC CGCCTCCGAC TCGTCCTGA
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| Protein sequence | MTTTNRTDGG IDDSNDGGSG GPPPGDLGSG SGADEPPDDR TDEEISREEA DDLIEEIERR
RSLRGPAAIA VAIIGIAFSV FQLFLAARSY TFTIWLPTVD IAGISIAPWQ VSLQLLQANA
IHVAFALVLT FLLFPVSTGD GMVTRNFGRI APAASQRLGD RSPVTRALEG GRTGLRWAFL
DPDRERVTPV DILFIAVAFL SAFYFMTEFA EIQNMRVFGV DSGRPVTEVY AFLQPLLGGV
PFVSEYSYAM ILGVAGILLV LEATRRTLGL PLMLIVATFI VYARWGYLIS GDTPFLGLLA
IPPLSWPDIV QNLWYNTENG VFGIPVTVSM SFIYIFILFG SFLEMSGAGQ WFIDLAYGLT
GDRKGGPAKA SILASGFMGT ISGSSIANTV TTGAFTIPLM KRSGYDPEFS GAVEASASSG
GQILPPVMGA AAFLMVQYTS TPFADIIIIA TIPAIVFFFG VWVMVHLKAV QEGIGGVSGE
DTVNFWDHFK RGWFYLVPIA LLLYYLIIER LSVSRSAWFT IVALVALVAL VSAYSEETRL
RLFAVFAAIV GVEFASHALA GVNVVGLVTG AGGAGLPPGE AFSAILAGIE WYAMLAGVLT
LLSKPDLDAS LLELNPSVQD TAETIGDRTD RDLENSQPFK LGTFVVTSME QGARTAVPVV
VAVAAAGIIP GVISVSGLGP NLTSLLLALS GGSIVIMLLV TAVSSIILGM GMPTTVTYII
LISMLATPLV EFGIPLLAAH LFILYFGVIA DITPPVAVAA YAASGIAKSD PFETGVKAFS
LSLNKAIVPF AFVLAPGIVL LREKANAADL PIREQYRVVG FADLAELSYS VPEILIPIAG
VFLGVIALGA TVIGTLYTRV GRLSRAVFAL SSLLLMAPGL LSESVFDTLG LVGVSVSVNA
LLLDLTLRAV GFVLFVLFAL RNRRTLDGEG DGAGETDATT GSTEAVAASD SS
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