Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_2296 |
Symbol | |
ID | 7400006 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | - |
Start bp | 2286577 |
End bp | 2288040 |
Gene Length | 1464 bp |
Protein Length | 487 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 643709369 |
Product | Na+/H+ antiporter NhaC |
Protein accession | YP_002566942 |
Protein GI | 222480705 |
COG category | [C] Energy production and conversion |
COG ID | [COG1757] Na+/H+ antiporter |
TIGRFAM ID | [TIGR00931] Na+/H+ antiporter NhaC |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.634393 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACGCT CGTTCACGCC CACAACGTAC GAGGACCTCG ATCCGGATCG CCGCCCGAGT CTCGCGGCGG CGCTGATCCC GGTCCTCGCC GTCGTGGCGT TCCTTGGTAT CGGCTCGGCC GTCCTCGGAC TGGACCCGCA CCCCCCGCTT CTCTGGAGCA TCGCCTTCGT CGGCGGGTTC GGCCTGTGGC TCGGCTACGA CTGGGAGGAA CTGTTCGACG GAATCGCCAA CGGGCTCGTG ATGGGGCTAC AGGCGCTTCT CATCATCTTC ACGATCTACG GGCTCATCGC GACGTGGGTC AGCGCCGGCA CGATTCCGGG ACTGATGTAC TACGGGCTGG AGATTCTCTC GCCGACGACG TTCCTGCCGG CGGCCGCGGT CGTCGCCGCC GTCGTCGCGT TCGCCATCGG TTCCTCGTGG ACCACGGTCG GCACCCTCGG TGTCGCCTTC GTCGGCATCG GTGCGGGGCT CGGCGTTCCC GCCCCGATGA CGGTCGGCGC CGTCCTCTCG GGTGCGTACG CCGGTGACAA GCAGTCGCCG CTCTCCGACA CGACGAACCT CGCAGCCGGC GTCACCAACA CCGATCTGTA CACGCACATT CGCCGGATGC GGACCGGTAC CGCCGTCGCC TTCGGGCTCG CGGTGCTCGG CTTCCTCGCG CTCGGACTCC GCGCCAGTGG GGAGATCCCG GTGGGTCGGA TCGCCGATAT CCAGGGCGCG CTCGGCGGGA CGTACGCAAT CACGCTGCTC GCATTTATCC CACTCGTGGT TACCTTCGGA CTGGCGCTGC GCGGGTACGC CGCGTTGCCG ACCCTCGTCG CCGGCGTGTT CGCCGGCGCG ATCACGACGA TTCTCGTGCA GGGGTCCGGT TTCGTCGCCG CGTGGAACAC CTTCATGTAC GGCACCGCGC CGGAGTCTGG GTCCGATCTG GTGAACGAAC TGCTCGCGAC GGGCGGGCTC ACCGGCTCTG CATGGACGAT CACGGTCGTC GTCGCCGCGC TCGCGCTCGG TGGTATCTTG GAGCGGACCG GCGTGCTGGC GGTGATCGCC CACTCGTTCA CCTCGTCCGT GAAGAGCCCG GGTGCGCTCG TCGCCGGGAC CGGCGTCTCG GCGATCGTCA TCAACGCGCT CACCGCCCAG CAGTACATGA GTATCGTCCT CCCGAGCGTC ACCCTTCGGA ACACCTACGA CGAGTTCGGA CTCGACAGCG ACCAACTCTC CCGTGCGGTC GAGGCCGCCG GGACGCCGAC CGGCGCGCTG TTCCCGTGGC ACGCGGGCGC CGTCTACATG GCGGGTGTCA CCGGAGTTCC GACCCTAGAG TACGCCCCGT ACTACCTGTT CGCGTTCCTG TCGCCCCTCG TGCTGTTCGT CATGGCGGCG ACCGGCTACT CGCTGAACGT GACGCCGGCC GCGGACCGGG CGCCCGCCGC CGACGAACCG GCCGTGGCGA CCGACGACGA CTGA
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Protein sequence | MARSFTPTTY EDLDPDRRPS LAAALIPVLA VVAFLGIGSA VLGLDPHPPL LWSIAFVGGF GLWLGYDWEE LFDGIANGLV MGLQALLIIF TIYGLIATWV SAGTIPGLMY YGLEILSPTT FLPAAAVVAA VVAFAIGSSW TTVGTLGVAF VGIGAGLGVP APMTVGAVLS GAYAGDKQSP LSDTTNLAAG VTNTDLYTHI RRMRTGTAVA FGLAVLGFLA LGLRASGEIP VGRIADIQGA LGGTYAITLL AFIPLVVTFG LALRGYAALP TLVAGVFAGA ITTILVQGSG FVAAWNTFMY GTAPESGSDL VNELLATGGL TGSAWTITVV VAALALGGIL ERTGVLAVIA HSFTSSVKSP GALVAGTGVS AIVINALTAQ QYMSIVLPSV TLRNTYDEFG LDSDQLSRAV EAAGTPTGAL FPWHAGAVYM AGVTGVPTLE YAPYYLFAFL SPLVLFVMAA TGYSLNVTPA ADRAPAADEP AVATDDD
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