Gene Hlac_2289 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_2289 
Symbol 
ID7399999 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp2278936 
End bp2280201 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content70% 
IMG OID643709362 
Producthypothetical protein 
Protein accessionYP_002566935 
Protein GI222480698 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.246375 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGCTCG ATCCGATCCA CGTCGAGAAC ATCGCGCAGC TCGCGTACGG TATCGCGGGC 
GACGTGGACA CGACCGATCA CGACGACCTC GCGGGACGGG TGTGGCGCGA GTGGCTCCCC
GAACTCCGCC ACGACGGGCG GGTCGTGATC GAACCCGTCG ACGAGCACGA GCGCCGGCGG
GCGCCGATCG ACGACGCCGC CCTCACCGAC CGCCCGTTCG AGACGGTCCA CGGGCTCGAC
TCCGGCACGA TCAACCCGAC CACATTTAAA AACGGGCTCG TCGTCGACGT GGCCCACGCC
GCGATGGCGA GCGCGCCGAC AGACTTGGAC CTCCACCGCG ACCGAACGAT CGTCGCGACG
GTTCACGCCG GCGACTCGAC CGCGAATTTC GACGGCGAGT GGACCTCGCG CGACGACGGC
CACACCCGCC AGCGCGTGCT CCACGCGCCG CGGGTGAACC GGTACGCCGA GGGGGTCGTC
CACGCGCTCG CCTTATACCT CGCCGAGGGG ACCCACGCGC TCGACCACGC CGACGAGGTC
GACGACCTGC TCGTGTTAGA CGGCCCGATC TACCCGAAAG AGCTGTTCAC GTGGGACGAC
CGGAACCCCG AACTGGGCGC GCTCGCCCGC GAGGCGAAGC CCCGCGCCGT AGTCGAGAAG
TACGTCCGGC TGGTCGAGCG GTTCGTCGAG CGCGACGTGC CGCTGGCCGG GTTCGTGAAG
AACCCCTCCA GCGGGACGAT CGTTCGCGCG TTGGCTCGGA AGGGCGTCGA ACCGCCGTGG
CCCGACGACA CGGCGCTTTT CACCCGGCTC TTGGAGCGGC GAGAGGGCGA CGGGGAAGGC
GGAGGCAGCC GACCCGACCG CGTCGACGAC GAGCTCACCT TCACCACGTG GTTCCGCAGT
CGGGGCGGCG CCGACGCGAC GATGGCCGCC GACGGCGACG CGCTCGGCAT CGAACGCGAG
CTCGACCCGG AGCTGTACGA GCCGACGTTC ATGGTCGTGT ACGACCCCCG GACCGACGTG
ACCTACAAGC TGGAGGCGCC GTACGCGTTC GCCCGCGACC CGTCGATCCG CGAGCGGCTC
ACTCGACAGG TCCTCGCCGA CGTGGCGACG ACCCGGGGTC CGCCGGAGGC GGTCGCGAAG
GCCGACGAGC TGGCGCGGAT CGCGGCGACG GAAAAGATCG CGCTCCGCCG GAAGTTCGAG
GAACGCTTCG ACAGCGACCA GCAGGCGACC TACGACGATC GGCGGTGGGG GAAAGAGCCG
TATTAA
 
Protein sequence
MTLDPIHVEN IAQLAYGIAG DVDTTDHDDL AGRVWREWLP ELRHDGRVVI EPVDEHERRR 
APIDDAALTD RPFETVHGLD SGTINPTTFK NGLVVDVAHA AMASAPTDLD LHRDRTIVAT
VHAGDSTANF DGEWTSRDDG HTRQRVLHAP RVNRYAEGVV HALALYLAEG THALDHADEV
DDLLVLDGPI YPKELFTWDD RNPELGALAR EAKPRAVVEK YVRLVERFVE RDVPLAGFVK
NPSSGTIVRA LARKGVEPPW PDDTALFTRL LERREGDGEG GGSRPDRVDD ELTFTTWFRS
RGGADATMAA DGDALGIERE LDPELYEPTF MVVYDPRTDV TYKLEAPYAF ARDPSIRERL
TRQVLADVAT TRGPPEAVAK ADELARIAAT EKIALRRKFE ERFDSDQQAT YDDRRWGKEP
Y