| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_2276 |
|---|
| Symbol | |
|---|
| ID | 7399986 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorubrum lacusprofundi ATCC 49239 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_012029 |
|---|
| Strand | - |
|---|
| Start bp | 2264510 |
|---|
| End bp | 2265439 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643709349 |
|---|
| Product | GTP cyclohydrolase |
|---|
| Protein accession | YP_002566922 |
|---|
| Protein GI | 222480685 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1469] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00294] conserved hypothetical protein TIGR00294 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.593749 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.169776 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCACC AGTTGCCGGA CGTTCAGGCG TCGGCGCCCG ACGTCTCCGT CGGGCTTTCG
CAGGTCGGCG TCACCGGCGT GGAGAAGCTC GTCAAGATCG CTCGGGGGGA CAAGCGCCCC
ATCGTCCTCA TGGCGGAGTT CGAGGTGTTC GTCGACCTCC CGAGCGGTCG CAAGGGGATC
GATATGTCGC GGAACCTCGC GACGATCGAC GAGATCCTCG AAGAGATCAC CCGCGAGGAG
GCGTACCGCG TCGAGGAGGT CTGTGGCGAC GCCGCCGAGC GACTCCTCGA AAAGCACGAC
TACACCACCA CCGCCGAGGT GTCGATGTCG GCGGAGCTCG TCACCCGCGA GGACACACCG
GCGTCCGGCA TCGAGACGCA GAGTACAGCG ACTATCGTCG CCAGCGCCAC GGCGACCGAG
GAGGACACCC GCGAGGAGAT CGGCGCCGAG GTCACCGGCA TGACGGTCTG TCCCTGCTCG
CAGGGGATGA GCGAGTCTCG CGCCCGCGAG AAGCTCGCGG ATCTGGGTGT CGACGAGGAG
ACGACCGAGG AGTTCTTGGA GGCCGTCCCG CAGCCGGGCC ACTCTCAGCG CGGCCACGCG
ACGCTCACCG TCACCACCGA CGGCCACCCC GATATCGACC TCCGGGACCT GATCGACGTC
GCTCGCGACT CGATGAGCGC CCGGATATAC AACATGGCGA AGCGCCCGGA CGAGGACCAC
ATGACCTACG AGGCCCACGC CGATGCGAAG TTCGTCGAGG ACTGTGTCCG CGCCCTCGCT
GAGGGCACCA TTGAGGAGTT CGGCCACCTC TCGGACGACG CCGTGATCCA CATGAAGCAG
TCGAACGACG AGTCGATCCA CCAGCACAAC GCCCACGCCG AACGCGAGGT CACGATGGGC
GACCTGCGGG ACGAACTGGA CGCGGAGTAG
|
|---|
| Protein sequence | MSHQLPDVQA SAPDVSVGLS QVGVTGVEKL VKIARGDKRP IVLMAEFEVF VDLPSGRKGI
DMSRNLATID EILEEITREE AYRVEEVCGD AAERLLEKHD YTTTAEVSMS AELVTREDTP
ASGIETQSTA TIVASATATE EDTREEIGAE VTGMTVCPCS QGMSESRARE KLADLGVDEE
TTEEFLEAVP QPGHSQRGHA TLTVTTDGHP DIDLRDLIDV ARDSMSARIY NMAKRPDEDH
MTYEAHADAK FVEDCVRALA EGTIEEFGHL SDDAVIHMKQ SNDESIHQHN AHAEREVTMG
DLRDELDAE
|
|---|
| |