| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_2248 |
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| Symbol | |
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| ID | 7399958 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | - |
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| Start bp | 2236834 |
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| End bp | 2238111 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643709322 |
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| Product | cysteine desulfurase, SufS subfamily |
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| Protein accession | YP_002566895 |
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| Protein GI | 222480658 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0520] Selenocysteine lyase |
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| TIGRFAM ID | [TIGR01979] cysteine desulfurases, SufS subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0748033 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0430442 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAGTTC AGGAACAGTA CCCGTTCGAC GTCGAGGCCG TCCGCGCCGA CTTCCCGATC
CTCGATCGGC TGGTCGGCGG CGATCCGGAG TCGCCCGGCG AGGGTCCCGG CGACGACACG
CCGCTCGTCT ATCTCGACAG CGCGGCGACC TCGCAAACGC CGGATCCGGT CGTCGACACG
ATTGTGGACT ACTACCGCGG CTACAACGCC AACGTCCACC GCGGGATCCA TCAGCTGAGT
CAGGAGGCCT CCGTCGCCTA CGAGGAGGCC CACGACACCG TCGCGGACTT CATCGGCGCG
TCGGGCCGCG AGGAGATCGT CTTCACGAAA AACACCACGG AGGCGATGAA CCTCGTCGCA
TACGCGTGGG GGCTCGAAGA ACTCGGGCCG GGCGACAACG TCGTCCTCTC GCAGATGGAA
CACCACGCGT CGCTGGTGAC GTGGCAGCAG ATCGGGAAGC GAACCGGCGC CGACGTGCGG
TTCATCGAGG TGACCGACGA GGGCCGGCTC GACATGGAAC ACGCCGCGGA GCTCATCGAC
GACGACACGC AGATGGTGTC GGTCGTCCAC GTCTCGAACA CGCTGGGCAC GATCAATCCG
ATCTCGGAGC TGGCCGACCT CGCGCACGAC CACGACGCGT ACGTCTTCGC CGACGGCGCG
CAGTCGGTGC CGACTCGGCC GGTCGACGTC GACGACCTCG GCGTGGACTT CCTCGCCTTT
TCCGGGCACA AGATGTGCGG CCCGACCGGT ATCGGGGCGC TGTACGGCCG CGAGGAGATC
CTCGACGAGG TGCAGCCGTA CCTCTACGGC GGTGACATGA TCCGACGCGT CTCCTTTACG
GACTCCACGT GGGAAGACCT CCCGTGGAAG TTCGAGGCCG GCACGCCTTC GATCGCGCAG
GGGATCGCCT TCGCGGCCGC GATCGAGTAT CTGGAAGAGA TCGGCATGCA GAACGTGCAG
GCCCACGAGG ATCTGCTGGC GGAGTACGCG TACGACGAGC TGACTGACCT CGGCGGCGTG
GAGATCTACG GGCCGCCGGG CAACGACCGC GGCGGTCTCG TCGCGTTCAA CGTCGAGGGC
GTCCACGCCC ACGATCTGTC CAGCATCCTC AACGACTACG GCGTCGCGAT CCGTGCCGGC
GACCACTGCA CCCAGCCACT CCACGACGAG CTTGGCGTCG CCGCCTCCGC GCGCGCCTCC
TTCTACCTCT ACAACACCGT CGAGGAGATC GACGCCTTGG TCGAGGCTGT CGGTGAGGCG
CGCGACCTGT TCGCGTAG
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| Protein sequence | MGVQEQYPFD VEAVRADFPI LDRLVGGDPE SPGEGPGDDT PLVYLDSAAT SQTPDPVVDT
IVDYYRGYNA NVHRGIHQLS QEASVAYEEA HDTVADFIGA SGREEIVFTK NTTEAMNLVA
YAWGLEELGP GDNVVLSQME HHASLVTWQQ IGKRTGADVR FIEVTDEGRL DMEHAAELID
DDTQMVSVVH VSNTLGTINP ISELADLAHD HDAYVFADGA QSVPTRPVDV DDLGVDFLAF
SGHKMCGPTG IGALYGREEI LDEVQPYLYG GDMIRRVSFT DSTWEDLPWK FEAGTPSIAQ
GIAFAAAIEY LEEIGMQNVQ AHEDLLAEYA YDELTDLGGV EIYGPPGNDR GGLVAFNVEG
VHAHDLSSIL NDYGVAIRAG DHCTQPLHDE LGVAASARAS FYLYNTVEEI DALVEAVGEA
RDLFA
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