| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_2192 |
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| Symbol | |
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| ID | 7401125 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | - |
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| Start bp | 2174847 |
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| End bp | 2176043 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643709262 |
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| Product | lycopene cyclase domain protein |
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| Protein accession | YP_002566839 |
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| Protein GI | 222480602 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03462] lycopene cyclase domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.035344 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCATCG CTCGGCACGA ACACGGACTA CAGGCTGACC TGCGGGCGTT GCTCTCGCAG
GTCCACCCGG TGTTCATGTT GCCGCCGCTT GCGGCCTCGT GGTTCGGTGC GGCCGTCGCC
GGCGAGTTCG CGCTCTCGGT GGGCGCGATT CACATGACCG CGATCTTCTT CGCGGTGTAT
ACGGCACACG TGAAGGACGG CTACGTCGAC TTCCATCGGC GCGGCGAGGA CGACGACCAT
CCGATGACGA TCCGCGGCTG TCGCCTCTCC CTTCTCGCCG CCGGCGTCGG CTTCGCCGTC
TGTACGCTCA CGCTCGGAGT ATTCGTCGGC CCGGGCGCCG CGCTCGTCAC CCTTCCGACC
TGGTTCATCG GGTATCTCCA CGCGCCACAG CTCGATACGA ATCCGCTCAC CACGACGCTG
GGGTACCCGA GCGGCATCGC GCTCGCGCTG CTCGGCGGGT TCTACGTCCA GACGACCGAG
ATGACCGCGG CGATACTCGG ATTCGCGCTC GTCTTCCTCG TGACACTCGC CGGGGTGAAG
ATCATCGACG ACGAACAGGA CTACGCGTAC GACAGATCGA TCGACAAACG GACCGTCTCG
GTACTGCTCG GCCGACCCCG AGCCCGGACG CTGGCGTTCT CTCTGCTGAT GGCCGGGCTC
GTCGGCGTTC TCTGGGGGAC AGTCGACGGA CTGTTTCCCC CGTCGGCGCC GGCCGCGGCG
CTCGCGTTCG CCCCGATAGC ACTGGTGGCC AGACGGGCCC GCCCGACGAT CGCGACGATG
CTACTGATCC GTGGCGCCTA CGTCTTCCTG GCCGTCCTGA TCGTGGCCGT CTGGTTTCGA
CCGCTGTCCG GCACCCCGCT TCCGGACATC ACCGTTCTCG GGTCGTACAC GTACCTCGCC
ACCGAGATCG TCTTCGGCGC GCTCGCGTTC GGCCTGCTCC GCTACGCCGG CGCGCTCCGT
CAGTCGGCCC GGACGATCGC CGCCCTGTAT CCGATCGCGT ACCTCTGGGA CTGGTACACG
CTGGAGATCG GCGTCTTCGA GATCACGATG CGCACCGGAT ACGACCTGTT CGGGATCCCG
ATCGAGGAGC ACCTCTTCAT GATCGTCGTG CCGGCACTTG TCCTCGGCAT TCACGAGACC
ATCCGGACGC TCTCGGCCGA GTCGGACGAC GCGTCTCGAA GCGATACTCA CAGGTGA
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| Protein sequence | MAIARHEHGL QADLRALLSQ VHPVFMLPPL AASWFGAAVA GEFALSVGAI HMTAIFFAVY
TAHVKDGYVD FHRRGEDDDH PMTIRGCRLS LLAAGVGFAV CTLTLGVFVG PGAALVTLPT
WFIGYLHAPQ LDTNPLTTTL GYPSGIALAL LGGFYVQTTE MTAAILGFAL VFLVTLAGVK
IIDDEQDYAY DRSIDKRTVS VLLGRPRART LAFSLLMAGL VGVLWGTVDG LFPPSAPAAA
LAFAPIALVA RRARPTIATM LLIRGAYVFL AVLIVAVWFR PLSGTPLPDI TVLGSYTYLA
TEIVFGALAF GLLRYAGALR QSARTIAALY PIAYLWDWYT LEIGVFEITM RTGYDLFGIP
IEEHLFMIVV PALVLGIHET IRTLSAESDD ASRSDTHR
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