| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_2160 |
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| Symbol | |
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| ID | 7401093 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | - |
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| Start bp | 2147775 |
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| End bp | 2149277 |
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| Gene Length | 1503 bp |
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| Protein Length | 500 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643709230 |
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| Product | 7-cyano-7-deazaguanine tRNA-ribosyltransferase |
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| Protein accession | YP_002566807 |
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| Protein GI | 222480570 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
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| TIGRFAM ID | [TIGR00432] tRNA-guanine transglycosylase, archaeosine-15-forming
[TIGR00449] tRNA-guanine transglycosylases, various specificities |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0308636 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.837825 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGATC ACTTCGAAAT CCGGGACCAC GACGCCGCCG GGCGGATCGG GCGGCTGGAG
GTCCCCCGCG CCGGGGTGAC CGTCGAGACG CCGGCGCTCC TGCCGGTCGT CAACCCCAAC
GTCCTCACGA TCGAGCCGCG GCGGCTCGCC GAGGAGTTCG GCGCGGAGAT GCTGATCACC
AACTCCTACA TCATCCGGAG CACCGACCGG ATCCGCGACC GCGTCCTCGA TCAGGGGCTC
CACGACTTCC TCGGGTTCGA CGGCGCGATC ATGACCGACT CCGGCTCCTT CCAGCTCGCC
GAGTACGGCG ACATCGACGT GACCACCGAG GAGATAATCG AGTTCCAGCG GCAGATCGGC
AGCGACGTGG CCACCCCGGT GGACGTGCCC ACGCCGCCCG ATGTCGACCG CGAGCGCGCC
GAGCGGGAAC TGGAGACGAC GAAGCAGGCG CTCGCCGACG CCGAGGCCGC TGAGACGGGC
GACATGCTGG TCAACGCCCC CGTGCAGGGG TCGACGTTCC CGGACCTCCG CGAGGAGGCG
GGACGCCACG CGAGCGCGAC CGATCTGGAC GTGTTCCCGG TCGGCGCGAT GGTTCCCCTG
CTGAACTCCT ACCGCTACGC CGAGGTCGTT GAGGCGGTGC GGGCGGCCAA ACGCGGGCTC
GACCCGGACG CGCCGGTCCA CCTGTTCGGC GCCGGCCACC CGATGATGCT CGCGCTGGCG
GTCGCGGCCG GCTGTGACCT GTTCGACTCG GCCGCCTACG CGCTGATGGC CCGTGACGGC
CGGTACCTGA CGGTCTCGGG GACCGAACAC CTCGAAGACA TGGAGTACTT CCCCTGCTCG
TGTCCCGTCT GCGCCGAGTA CACGCCCGCG GAGCTCCGAG AGATGGACGG GAGCGGCGGG
GACAGCGCCG ACCAGTCCGC GGAGCAGCTC CTCGCCGAGC ACAACCTCCA CGTCACCTTC
GAAGAGCTAC GGCGCGTGAA GGCCGCGATC CGGTCCGGAA ACCTCCTTCA GCTCGTCGAC
CGCCGCGCCC GCGGCCACCC CGCGATGCTC GACGGGTTCC GGGTCCTCCT CGATCACGCC
GACGAACTGG AGCGGACGGA CCCGGTCTCG AAGGACGCGT TCTTCTACAC CTCCCACGAG
TCGGCCCGCC GCCCCGAGGT CAGTCGACAC CACGACCGGC TCTCGCGGCT CGCGGTCCCC
GACCGCCTTC TCCTCACCGA GTCGGACGCG CCGTCGAACC ACGATTACGA CGCGGTGTGG
CGCGTGAAAC CCCCGTTCGG TCCCTTCCCT CGCGCGCTCT CCGAGACGTA CCCGCTCACC
GCAGAGGTCC CGGAGCGGAT CGACGGTGCG GCGCAGGTCG CGGCCGCCGA GGGCGTCGCG
AGTCTCGCCG AGTCCAACCC CGACACCGAA CTCACGCTCG GCCACGACGA CTGGGTGCCG
CGCGCGGTCG ACGCGGTTCC GGACCGCGTC GAGACGGAAA ATCTGCGGCA CCTCGGTCGC
TGA
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| Protein sequence | MRDHFEIRDH DAAGRIGRLE VPRAGVTVET PALLPVVNPN VLTIEPRRLA EEFGAEMLIT
NSYIIRSTDR IRDRVLDQGL HDFLGFDGAI MTDSGSFQLA EYGDIDVTTE EIIEFQRQIG
SDVATPVDVP TPPDVDRERA ERELETTKQA LADAEAAETG DMLVNAPVQG STFPDLREEA
GRHASATDLD VFPVGAMVPL LNSYRYAEVV EAVRAAKRGL DPDAPVHLFG AGHPMMLALA
VAAGCDLFDS AAYALMARDG RYLTVSGTEH LEDMEYFPCS CPVCAEYTPA ELREMDGSGG
DSADQSAEQL LAEHNLHVTF EELRRVKAAI RSGNLLQLVD RRARGHPAML DGFRVLLDHA
DELERTDPVS KDAFFYTSHE SARRPEVSRH HDRLSRLAVP DRLLLTESDA PSNHDYDAVW
RVKPPFGPFP RALSETYPLT AEVPERIDGA AQVAAAEGVA SLAESNPDTE LTLGHDDWVP
RAVDAVPDRV ETENLRHLGR
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