| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_2157 |
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| Symbol | |
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| ID | 7401090 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | - |
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| Start bp | 2144100 |
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| End bp | 2145902 |
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| Gene Length | 1803 bp |
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| Protein Length | 600 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643709227 |
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| Product | PUA domain containing protein |
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| Protein accession | YP_002566804 |
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| Protein GI | 222480567 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1549] Queuine tRNA-ribosyltransferases, contain PUA domain |
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| TIGRFAM ID | [TIGR00449] tRNA-guanine transglycosylases, various specificities
[TIGR00451] uncharacterized domain 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.516872 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGACT ACTTCGAGAT CCACGAGCGC GACGGCGCCG CCCGGCTCGG GGAGCTCCGG
CTCGCCGACC CGGTGACGAC GCCGGCGCTC GCGGACCCGT TCTTAGCGGA CGCGGGCAGC
CTCTGGGCCG CCGAGCGGAC GGTCCCCGAC GGCGACGAGG CCTCGCTCAC CGTTCTGCCG
CATCGCGCGT TCCCCGCGGG AACCCGCGGA GAGGTCCGCG AGTCGTTCGC GGTCGATCAC
CCCGAGGTCG ACTTCCCCGC CGCGGCGGTC GTCGACAGCG AGAGCGCCCG CCACGTGGGC
GCTGACGCGT ACGTCCTTGC GGACGCCTCC GGGTTCGTCG GCCACGGCGA GGCGTTCCGC
GACGCGATCG TCTCCGCGAA GGAGTCGCTC CCCGCCGACA CCGCCTTGAT GCTGTCGGGC
GTCGCCACGC CCCGGAACGT CGCGCTCCTC GCGTACGCCG GCGTCGACCT CGTTGACGAG
ACGCTCGCGC GAACGAAGGG GGCGCAGGGG ATGTACTGCA CCGCCGACGC CGAGCACTTC
CTCGAGGACC TCGACGAGCT CCCGTGCGCC TGTCCGGCCT GCGCGGGGCC TCGAGAGGAG
TTCACGCGCG CGGACTGCGC CGAGCACAAC GTCAACGCGC TCCGCGCCGA GCTCCGACGG
GTCCGCGAGC GGATCCGGGC GGGTCGTCTG CGAGACTACA TCGAGGGCCA GACCCGTCAC
GAGCAGTGGC TCACGGCGGC GTTCCGCGAG TTCGACGACC AGTGGGGGTA CGTCGAGGAG
CGGACCCCGC TCATGCGTGA CGCCGAGGTG ACCGCGGCGA CCGCGGAGAC GCTGGACCGC
GTCGAGATCC GGCGGTTCGC CGACCGCGTC ACGAGCCGGT ACCAGAATCG GTTCACCGAC
CAGCCGCTCG TCCTCGTCCC CTGTTCGGCC ACCAAACCGT ACAGCGACTC TCAGAGCCAC
GGGCAGTTCC ACGACGCGAT CCAGTGGCGC GGTCACACCG TTTCGATGAC CTCGCCGATC
GGCGTGGTGC CCCAGGAACT GGAGACGACC TACCCCGCCC AGCACTACGA CGCCGTCGTC
ACGGGCGACT GGAGCGAAGA CGAGATCGGG TTCGTCGCCG AGGTGCTGCG GCGGTATCTG
GAGCGGAACG ACTACTCCCG GGTCGTCGCG CACGTCCCCG AGGACGGCTA CCGCGAGATC
TGCGAGCGCG TCGAGAGCGA CCCCGCGATC GACGTGTCCT TCGAGTACAC CTGCGTCGGC
CACCCGACGA GCGACGAGTC GCTCGGGGAG CTGAACGCCG CCTTACAGGG CGAGCCCGCC
TACAGCAAGC GGGAGCGCGA GCACAACACG GTCCGGGCGC TCGCCGACTA CCTCCTCGGC
GACGGCGCGG GCGACGACCT GTTCGGCGGC CCCGGCGAGG CCGACATCCG CACCACCGGA
CGCTACCCCA AACTGCAGGT GTGGGGCGAC GACCCCGACG CCGGCCGCGA GGGCGAGCCG
GGCGAACAGC TCGCGACGAT GGTGCCGCAG TATGGCACCC TCTCCTTTAC TCTCGCCGGC
GCGCGCCGCT GGGCCGAGAG CGACGCTCCC ACCAAGCGGG TCGAGATCGA CCCGTTCGTC
CCGCACGGCT CCGTCTTGGC GCCCGGCGTC GTCGACGCGG ACGACGATAT TCGCGTCGGC
GACGAGGTCG TCATCGAGGG ACCGAAGGCG TTCGCGATCG GTCGCGCCGA GATGTCCGGC
CCGGAGATGG TCGAGTCGAC GCGCGGCGTC GCCAGCGAGG TCCGGCACGT CGACGAGACG
TAG
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| Protein sequence | MTDYFEIHER DGAARLGELR LADPVTTPAL ADPFLADAGS LWAAERTVPD GDEASLTVLP
HRAFPAGTRG EVRESFAVDH PEVDFPAAAV VDSESARHVG ADAYVLADAS GFVGHGEAFR
DAIVSAKESL PADTALMLSG VATPRNVALL AYAGVDLVDE TLARTKGAQG MYCTADAEHF
LEDLDELPCA CPACAGPREE FTRADCAEHN VNALRAELRR VRERIRAGRL RDYIEGQTRH
EQWLTAAFRE FDDQWGYVEE RTPLMRDAEV TAATAETLDR VEIRRFADRV TSRYQNRFTD
QPLVLVPCSA TKPYSDSQSH GQFHDAIQWR GHTVSMTSPI GVVPQELETT YPAQHYDAVV
TGDWSEDEIG FVAEVLRRYL ERNDYSRVVA HVPEDGYREI CERVESDPAI DVSFEYTCVG
HPTSDESLGE LNAALQGEPA YSKREREHNT VRALADYLLG DGAGDDLFGG PGEADIRTTG
RYPKLQVWGD DPDAGREGEP GEQLATMVPQ YGTLSFTLAG ARRWAESDAP TKRVEIDPFV
PHGSVLAPGV VDADDDIRVG DEVVIEGPKA FAIGRAEMSG PEMVESTRGV ASEVRHVDET
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