| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_2149 |
|---|
| Symbol | |
|---|
| ID | 7401082 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorubrum lacusprofundi ATCC 49239 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_012029 |
|---|
| Strand | - |
|---|
| Start bp | 2136945 |
|---|
| End bp | 2137970 |
|---|
| Gene Length | 1026 bp |
|---|
| Protein Length | 341 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643709219 |
|---|
| Product | ABC-type nitrate/sulfonate/bicarbonate transport systems protein |
|---|
| Protein accession | YP_002566796 |
|---|
| Protein GI | 222480559 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTACGAGC GAAACGCGGG AGCCTCGCGA CGGTCCTTTC TTGCGGCCGC GGGCGGAGCG
GCCACGGTCG GTCTCGCCGG CTGTCTCGGC GGCGACGACG GCGGACTCAA CGAACTGACG
GTCGCACACA TGCCGATCTA CCCCGACCTC CAGTGGTACG TGATGGAGGG CGAGGGCTAC
TTCTCCGAGA TCGACGCCGA GATCACCGGC CGAGAGTTCA CCGACGGCCC GTCGATCGTG
CAGGCGATCG GCGGCGGCGA CATCGACGTC GCCATGTTCG GGATCGTGCC GGCGATGATC
GTCATCGACC GCGACATCCC CGCGCAGGTG ACCGCGGCGA ACATCCGCGA ACCGATGGGG
ATCATGGCCG AGGAGTCGTT CCACGAGACC TTCGAGGCGG AGGGCGGCGA CGCGTTCGCG
ACGTGGGCCG AGGAGAACGG CGGGCCCTTC CGGTTCGGCA CCTTCCCGCA GGGCAGCGTC
CCGGACGTGC TGCTCCGCTA CTGGCTCCAG GAGATCGGCG TCGACCCCGA GTCGAACGAG
AACGTCGAGA TAATCGAGAT CAACGGCGCG AGCGCCGTCT GGCAGGCGAT CGCCAACGAC
GAGATCGACG GCACCTCGAT CATGGAGCCG GTGCCAACGA TCGCCCAAGA GGAGGGCTCG
TCCGTCACGA TGCTCCGGAC GGCCGCGCAG ATCCTCCCCG GCCAGCCCGC GGCGGTCACC
CTGATGAGCG ACGCGGTCCG CGACTCTCCG CTCGCCGTGC AGTTCGTCGA GCAGCACGTC
CGTGCCACCG ACTTCATCGA CGAGAACCCG GACGCGACCG CCGGGCACGT CGAGTCGGGG
ATCGGGATGC CGGCTGACCG CGCCCGCCGG GCGCTCGACT CGCCGCTGTC GAACTTCGTC
ACTGACCCCC GCGAGATCAC CGAGGCGACC CCGGTCTTCT CGGAGTTCGC GGCGAACAAC
GGACAGATCG ACGAACAGCT GTCGAACGAG GCGATCTTCG ACTTCGAGGT GTACGACTCG
CTCTGA
|
|---|
| Protein sequence | MYERNAGASR RSFLAAAGGA ATVGLAGCLG GDDGGLNELT VAHMPIYPDL QWYVMEGEGY
FSEIDAEITG REFTDGPSIV QAIGGGDIDV AMFGIVPAMI VIDRDIPAQV TAANIREPMG
IMAEESFHET FEAEGGDAFA TWAEENGGPF RFGTFPQGSV PDVLLRYWLQ EIGVDPESNE
NVEIIEINGA SAVWQAIAND EIDGTSIMEP VPTIAQEEGS SVTMLRTAAQ ILPGQPAAVT
LMSDAVRDSP LAVQFVEQHV RATDFIDENP DATAGHVESG IGMPADRARR ALDSPLSNFV
TDPREITEAT PVFSEFAANN GQIDEQLSNE AIFDFEVYDS L
|
|---|
| |