Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_2110 |
Symbol | |
ID | 7400630 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | + |
Start bp | 2101284 |
End bp | 2102033 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643709180 |
Product | Xylose isomerase domain protein TIM barrel |
Protein accession | YP_002566757 |
Protein GI | 222480520 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.517822 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.355951 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATATCG GGCTCACCGT CGGCGACGAC CTCGACCGGC TCGCGGCGTC GCCGAAGCGG TTCGACTTCT GCGAGCTCGG GGTCGGCGAG CCGACGCTCG TGCCGGGCGA TATCGACCCG GAACGTCTCG ACGACGCGCT CGCCGGCCGC GATCTGCTCG TCCACCTCCC GTACAGCCAG CGGCTGGCCA GCTACGTCCC CGAGGTCAAC GACGCCATCG TCGACTACCA GCGCCGACTC TTGGAGGCCG CCGGCGAGTT GGGCGCGGAA AAGGCCGTCC TCCACGCGAC CTCCGCCGAC CGCGACGACA CCGAGTTCCG CGAGGTCGCC GCCGAGCAGC TCCGGCGGGT CGCCGACGCC GGCCGCGACG CGGGCGTCGA GGTCGTCGTC GAGAACGTCG GCCACCAGCA CGCGGGGCTC CAGCTGTCCG TCCTCGGCGA TATCGCTCGG GAGACCGACA CCCGGATCTG CTTCGACCTC GGCCACGCGT ATATGGAAGG CGACAACAAG GCGATCAAAC GGTTCCTCCG GAGCCACGGG GGCCGGATCT CACACCTCCA CTGTCACGAC GCCCGCCGCC GGGGTGACAC CCACCTTCCC GTGGGAGCCG GCGAGGTCGA CTACGGCCAC GTGGAGTCCG AACTCGGCGA TTTCGACGGG ACGGTCGCCC TTGAGGTGTT CACCGACGAC GAGACGCTCC TCCTCGACTC GGCCCGACGG ATCGCGGAGC GGCTCGGCGT CGACTTTTAA
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Protein sequence | MDIGLTVGDD LDRLAASPKR FDFCELGVGE PTLVPGDIDP ERLDDALAGR DLLVHLPYSQ RLASYVPEVN DAIVDYQRRL LEAAGELGAE KAVLHATSAD RDDTEFREVA AEQLRRVADA GRDAGVEVVV ENVGHQHAGL QLSVLGDIAR ETDTRICFDL GHAYMEGDNK AIKRFLRSHG GRISHLHCHD ARRRGDTHLP VGAGEVDYGH VESELGDFDG TVALEVFTDD ETLLLDSARR IAERLGVDF
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