| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_2036 |
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| Symbol | |
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| ID | 7402055 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | + |
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| Start bp | 2028381 |
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| End bp | 2030072 |
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| Gene Length | 1692 bp |
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| Protein Length | 563 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 643709107 |
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| Product | protein of unknown function DUF181 |
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| Protein accession | YP_002566684 |
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| Protein GI | 222480447 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1944] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00702] uncharacterized domain
[TIGR03604] bacteriocin biosynthesis docking scaffold, SagD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0289934 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.387863 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATATCG GACTTGTCGG TGACGGCCCC GCGGTCGAGG CCGTCTCGGC CGCGCTCGGC
GACGTCGACG TGAACGTGAT GCCCGTCGAA GTGGGGCTGC TCGACGGGTT CGACCTCGCG
GTCGTGGTCG ACACCGCCGG ATCGGAGACG TTCGCCGCCG CCAACGAGCA CCTGGACCGC
TGGGTCGCAA TCGAGGTCGG CGGACTCGGC GGCGTCCCCC TGGAGCCTGT CGACGCCGCG
GTGACCGCCT TCGACGAGAC CTGCTACGAC TGCCTCCGGC GACGCGTCGC CAGCGGCGGA
GCCGAGCCCG CCGACGCGCC GGCCGGCCGC CGGTCGGCCG TGCGCTACGC CGGCGCGCTG
GCCGGGCGCC GCGTCATCCA ACTGCTCGCC GGCGACCCGG TCGCCGACAC GGTCGTCGAG
GTACCGGGTG CCGAGCGCAC CCTCCTCCCG GTTCCCGGCT GTGACTGCGG CGCCGACCCG
GGCGACGCGC TGCCCCGCGA GCATCAGGAG CGATCGCTAT CGGACGCGAT CGACCGCGCG
GAGCGGGCGG TCGATCCCCG AATTGGTCTG CTCTCGGAGG TGGGCGAACA GGAGTCGTTC
CCCGTGCCGT ACTACGTCGC GCGGGTCGCC GACACGACGC CCTTCTCCGA CGCGCGGGCG
GCCGAGTTCG GCGGCGGCGT CGACGCCGGG TGGGACGCCG CGTTCATGAA GGCGCTCGGC
GAGGGGTTAG AGCGGTACGC CGCCGGAGTC TACCGCGGGG CGTCGTTCAC GCGCGCGCCG
GCCGCGAACG TCCCGAATCC CGTGGCGCCC GACGCGTTCG TCCGTCCCGA GAGCGCGGAG
CCGTACGCCC GCGACGACCG ACTTCCGTGG GTGACCGGCG AGCATCTCGG AACCGGGGAG
GTCGCGAGTC TGCCGGCGGA GTTCGTCCAC TTCCCGCCGC CGGAGAACCG GTATCGGCCC
GCGATCACGA CCGGGCTCGG CCTCGGAAAC TCCGGACCGC ACGCGGCGCT GTCGGGACTC
TACGAGGCGA TCGAGCGCGA CGCGACGATG ACAAGTTGGT ACTCGACGGC CGACCCGCTC
GGAATCGAGG TCGACGACGA GGGGTTCGCG GAACTGGAGA AACGCGCCCG CACCGAGTCG
CTGTCGGTGA CCCCGCTCCT CGTCACGACC GACATCGACG TGCCCGTCGT CGCGGTCGGC
GTGCATCGCG AGGGCGACTG GCCCCGCTTC GCGGCGGGGT CGGGCGCCGA CCTCGATCCC
GCCGCCGCGG CCCGGAGCGC GCTCGCGGAG GCGCTCCAGA ACTGGACCGA ACTCCGGTCG
ATGGGTCCCG ACGCGGCCGC AAAGCAGGGT GCGGCGATCG GTCGCCACGC CGACTTCCCG
GCGGAGACGC GGGCGTTCTT CGACGCGGAC GCGACGGTCC CCGCCGAATC GCTCGGCGAG
CCGGAGCTGT CGGGAGGCGA CGAGCTAGCC GCCGTCGTCG ACCGCGCCGA GGCGGTCGGA
CTGGAGCCGT ACGTCGCGCG GACGACGACC CGAGACCTCG CCGCGCTCGG CTTCGAGGCG
GTCCGCGTGC TCGTTCCCGG CGCGCAGCCG CTGTTCACCG GCGACCCGTT CTTCGGCGAC
CGCGCCCGCG ACGTGCCCCG ATCGATGGGG TTCGAGCCCG ACTTGGAGAA GGCGTACCAC
CCGTTCCCCT GA
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| Protein sequence | MDIGLVGDGP AVEAVSAALG DVDVNVMPVE VGLLDGFDLA VVVDTAGSET FAAANEHLDR
WVAIEVGGLG GVPLEPVDAA VTAFDETCYD CLRRRVASGG AEPADAPAGR RSAVRYAGAL
AGRRVIQLLA GDPVADTVVE VPGAERTLLP VPGCDCGADP GDALPREHQE RSLSDAIDRA
ERAVDPRIGL LSEVGEQESF PVPYYVARVA DTTPFSDARA AEFGGGVDAG WDAAFMKALG
EGLERYAAGV YRGASFTRAP AANVPNPVAP DAFVRPESAE PYARDDRLPW VTGEHLGTGE
VASLPAEFVH FPPPENRYRP AITTGLGLGN SGPHAALSGL YEAIERDATM TSWYSTADPL
GIEVDDEGFA ELEKRARTES LSVTPLLVTT DIDVPVVAVG VHREGDWPRF AAGSGADLDP
AAAARSALAE ALQNWTELRS MGPDAAAKQG AAIGRHADFP AETRAFFDAD ATVPAESLGE
PELSGGDELA AVVDRAEAVG LEPYVARTTT RDLAALGFEA VRVLVPGAQP LFTGDPFFGD
RARDVPRSMG FEPDLEKAYH PFP
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